Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1099 ATGGCCGCGACTAGACCCAAACGGCGGAATCAGTTGTCCATCTCCATCCTATTTCTTTTCTCACTCTCCGTCCTTCTCTCTATTTCTTCCGGCCGCGAAACCTCCTCCTTCATCAACCACCGCAAGATAGCCGCCGCTGGAACTTCCTCTTCTTCCACTTCGAACTCCAGCTACGCTGTGATTTTCGACGCCGGAAGCTCCGGCAGCCGCGTCCACGTCTTTCACTTCGATCGGAATCTGGATTTGCTCTTCATTGGTTCAGAGATTGAGGTTTTCTCACAGATAAAGCCAGGGTTGAGTTCATACGCGGATGATCCTAAGAAAGCCGCGGATTCTCTAATTCCTTTACTGGAGAAAGCAGAAAATGCGGTTCCTCAGAAAGTGAAATCCGTGACGCCGATTCGCCTAGGGGCGACGGCAGGGCTTAGGTTTCTGGAAGGGGACAGATCTGAGAGGATTTTGGAAGCGGTAAGGGTTCTTCTGAAAACCACGAGCAGATTCAAGTATGAACAGGATTCGGTTTCCATTTTAGATGGAAATCAAGAAGGCTCTTATCAATGGTTGACAATAAACTATTTGCTAGAGAATTTGGGGAAGAAATACTCAAAAACAGTGGGAGTAATTGATCTTGGAGGTGGGTCTGTTCAAATGGCATATGCAATTTCTGATGAAGATGCAGCAAAGGCACCCATTGCTTCAGATGGAAACACCAAATTTGTTCAAAATTTCTACCTCAAGGGTTCAAATTATAACCTCTATGTTCACAGTTATTTGCGTTACGGTTTACAAGCTGCCCGAGTAGAGATCTTGAAGGTGACCAAAGACCTTGGCAACCCTTGCATTTTAGCTGCCTATCAAGGTACATACACATACGGTGGGGAGGAGTACAAAGTGTCAGCCCCAGAGTCAGGGTCGAGCTTCGCCCGTTGCCGGAAGGTAATTCTCGAGGCATTGAAAATTAACAAATCATGTGGCTACAATGAATGCACTTTTGATGGTATATGGAGTGGCGGCGGAGGAGCCGGCCTCAACAATCTCTATGTTGCTTCCTTTTTCTTTGACAAGGCAGCTCAGGCTGGTTTCATAGATTCCAACAAACCAGATGCCATAGTGAAGCCCTTTGATTTCAAGAAAGCAGCAAGGATTGCCTGTCAAACTAAGTTTGTTGATGCAAGGGCTAAATATCCTAATGTTTACTCAAGTGACTTGCAATTTGTGTGTTTGGATCTTGTTTACGAGTACACCCTACTCGTCGATGGATTCGGTATTGATTCTAGAAAAAAGATCACATTGGTGAAGCAAGTGGCATATCATGGTTCTCTTGCAGAGGCAGCATGGCCATTGGGCAATGCTGTAGCAATCCTCTCATCATCAAAGTACTCAACTGCAAATTATTATTGA 1401 45.47 MAATRPKRRNQLSISILFLFSLSVLLSISSGRETSSFINHRKIAAAGTSSSSTSNSSYAVIFDAGSSGSRVHVFHFDRNLDLLFIGSEIEVFSQIKPGLSSYADDPKKAADSLIPLLEKAENAVPQKVKSVTPIRLGATAGLRFLEGDRSERILEAVRVLLKTTSRFKYEQDSVSILDGNQEGSYQWLTINYLLENLGKKYSKTVGVIDLGGGSVQMAYAISDEDAAKAPIASDGNTKFVQNFYLKGSNYNLYVHSYLRYGLQAARVEILKVTKDLGNPCILAAYQGTYTYGGEEYKVSAPESGSSFARCRKVILEALKINKSCGYNECTFDGIWSGGGGAGLNNLYVASFFFDKAAQAGFIDSNKPDAIVKPFDFKKAARIACQTKFVDARAKYPNVYSSDLQFVCLDLVYEYTLLVDGFGIDSRKKITLVKQVAYHGSLAEAAWPLGNAVAILSSSKYSTANYY 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19501171 19515465 + CcPI632755_03g010990.1 Cco03g1099 174458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1099 466 Gene3D - 58 451 - -
Cco03g1099 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 177 192 IPR000407 GO:0016787(InterPro)
Cco03g1099 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 52 460 IPR000407 GO:0016787(InterPro)
Cco03g1099 466 Gene3D Exopolyphosphatase. Domain 2 178 436 - -
Cco03g1099 466 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 456 IPR000407 GO:0016787(InterPro)
Cco03g1099 466 FunFam Apyrase 1 178 436 - -
Cco03g1099 466 CDD NBD_sugar-kinase_HSP70_actin 60 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1099 Cco-Chr3:19501171 Cco04g0765 Cco-Chr4:22800939 1.10E-146 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1099 K14641 - mdm:103428652 514.612