Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1319 ATGGAAGCTGCTTTCTTATTCATTAGTCAATTGGCACACCATTATTCCCTGATTGACATATCCAAAATTGTCATTGTGTTTGTATTTATGGCTTTCATTTTTGTTATGTTTTCCCAACATTGTAACCTCAAAAGAAAACACTTCATCCGACAACAAGCACCTCTTCCACCAGGCCCAAAGCCATGGCCTATTGTTGGGTGCCTCCCAGCAATGTTGTTGAGGAAAAATTCTCCAACACACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATTGCCTCCATACGCCTTGGAAACACTTACATAATCCCTATCACTTCTCCACAACTTGCTCTTGAATTTCTTAAGACCTATGATTCTGTCTTTGCATCACGTTCCTCCATTTCCAACACTATTCATATCTTAAGTCGTGGATATCTCACCACAGCATTTTCGTCTATGGGAGACCAATGGAAGAAGATGAGAAGAATTCTCTTATCAGAAGTACTCAATCCATCAACTCTCCACCGAATGCTTGGCCAAAGAACCGGTGAAGCTGATACTCTTTTACACTATGTTTTCACCCAAACCAGTAGTAATGGAGGAGGTGCGGTGATTAACGTTAGAAACATAGCACAACATTATTGCGGTAACATTATTCGAAGAATGCTATTCAATAGAAGATATTATGGCAAAGGGAAGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGAACATAATCAAGCATTGTTGACCATTCTCAGACATGTTAATGCATTTTCTATATCAGATTTCATGCCCTATTTGAAGCCTTTTGATTTAGATGGACATCAAAAAATTATGAAGAATGCTTTGAATGTCCTTAGAAAGTATGACGATCCCATTATAGATGAAAGAGTGCAACAATGGAAGAAAGATGAGAAAATAGATGGGGTAGAGGACATTCTTGATATCCTCATTTCACTTAAAGATGAGAATGCAAATTCCTTGTTGTCAATTGAAGAGATCAAGGCTCAAATCACAGAGTTACAAATTGCGACAGTTGATAATCCATCGAATGCAGTGGAATGGGCAATGGCAGAACTAATCAATCAACCAAAAGTTCTCAAGAAAGCCGTTGAAGAATTGGACGAAGTAGTTGGAAAAGAAAGGCTAGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCATCGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCTTTCAATATTCCTCATGTCTCAAACTCTGACATCATTGTGAATGGTTACTTAATTCCCAAAGGTAGTGAAGTTTTGCTCAGTCGTTTAGGTCTTGGCCGAAACTCAAGAATTTGGGAAAATCCAAACAGATTTAATCCAAAACGTCACCTGAAAGATGAGACAGTTGAATTGGGATTATCAGAACCTAGTCTACGATTCATCACATTCACTAGAGGGAGGAGAGGCTGCATTGGTAGTTCACTTGGCACTAACATTACCATGATGCTATTTGCTAGACTTCTACAAGGATTTTCATGGAGCTTACTGCCAGGAATAAAAAAAATTGAGTTCTCTAAAACTAATCATGAACTCTCCCTCATGAACCCGTTACAGCTACATGCAAAACCACGTTTATCTAATACTAGGTACCCTAAGGTTATTTGA 1644 38.32 MEAAFLFISQLAHHYSLIDISKIVIVFVFMAFIFVMFSQHCNLKRKHFIRQQAPLPPGPKPWPIVGCLPAMLLRKNSPTHQWIHSVMKQFNTEIASIRLGNTYIIPITSPQLALEFLKTYDSVFASRSSISNTIHILSRGYLTTAFSSMGDQWKKMRRILLSEVLNPSTLHRMLGQRTGEADTLLHYVFTQTSSNGGGAVINVRNIAQHYCGNIIRRMLFNRRYYGKGKEDGGPTFEEEEHNQALLTILRHVNAFSISDFMPYLKPFDLDGHQKIMKNALNVLRKYDDPIIDERVQQWKKDEKIDGVEDILDILISLKDENANSLLSIEEIKAQITELQIATVDNPSNAVEWAMAELINQPKVLKKAVEELDEVVGKERLVQESDIPKLKYLIACIRESFRLHPFSPFNIPHVSNSDIIVNGYLIPKGSEVLLSRLGLGRNSRIWENPNRFNPKRHLKDETVELGLSEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWSLLPGIKKIEFSKTNHELSLMNPLQLHAKPRLSNTRYPKVI 547
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 26504044 26506122 + CcPI632755_03g013190.1 Cco03g1319 174678
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1319 547 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 26 543 IPR051382 -
Cco03g1319 547 Gene3D Cytochrome P450 48 543 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1319 547 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1319 547 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1319 547 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1319 547 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1319 547 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1319 547 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1319 547 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1319 547 SUPERFAMILY Cytochrome P450 56 537 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1319 547 Pfam Cytochrome P450 56 526 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1319 Cco-Chr3:26504044 Cco03g1321 Cco-Chr3:26528300 1.50E-251 dispersed
Cco03g1318 Cco-Chr3:26471977 Cco03g1319 Cco-Chr3:26504044 2.20E-241 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1319 - - - 0.0