Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco03g1319 | ATGGAAGCTGCTTTCTTATTCATTAGTCAATTGGCACACCATTATTCCCTGATTGACATATCCAAAATTGTCATTGTGTTTGTATTTATGGCTTTCATTTTTGTTATGTTTTCCCAACATTGTAACCTCAAAAGAAAACACTTCATCCGACAACAAGCACCTCTTCCACCAGGCCCAAAGCCATGGCCTATTGTTGGGTGCCTCCCAGCAATGTTGTTGAGGAAAAATTCTCCAACACACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATTGCCTCCATACGCCTTGGAAACACTTACATAATCCCTATCACTTCTCCACAACTTGCTCTTGAATTTCTTAAGACCTATGATTCTGTCTTTGCATCACGTTCCTCCATTTCCAACACTATTCATATCTTAAGTCGTGGATATCTCACCACAGCATTTTCGTCTATGGGAGACCAATGGAAGAAGATGAGAAGAATTCTCTTATCAGAAGTACTCAATCCATCAACTCTCCACCGAATGCTTGGCCAAAGAACCGGTGAAGCTGATACTCTTTTACACTATGTTTTCACCCAAACCAGTAGTAATGGAGGAGGTGCGGTGATTAACGTTAGAAACATAGCACAACATTATTGCGGTAACATTATTCGAAGAATGCTATTCAATAGAAGATATTATGGCAAAGGGAAGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGAACATAATCAAGCATTGTTGACCATTCTCAGACATGTTAATGCATTTTCTATATCAGATTTCATGCCCTATTTGAAGCCTTTTGATTTAGATGGACATCAAAAAATTATGAAGAATGCTTTGAATGTCCTTAGAAAGTATGACGATCCCATTATAGATGAAAGAGTGCAACAATGGAAGAAAGATGAGAAAATAGATGGGGTAGAGGACATTCTTGATATCCTCATTTCACTTAAAGATGAGAATGCAAATTCCTTGTTGTCAATTGAAGAGATCAAGGCTCAAATCACAGAGTTACAAATTGCGACAGTTGATAATCCATCGAATGCAGTGGAATGGGCAATGGCAGAACTAATCAATCAACCAAAAGTTCTCAAGAAAGCCGTTGAAGAATTGGACGAAGTAGTTGGAAAAGAAAGGCTAGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCATCGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCTTTCAATATTCCTCATGTCTCAAACTCTGACATCATTGTGAATGGTTACTTAATTCCCAAAGGTAGTGAAGTTTTGCTCAGTCGTTTAGGTCTTGGCCGAAACTCAAGAATTTGGGAAAATCCAAACAGATTTAATCCAAAACGTCACCTGAAAGATGAGACAGTTGAATTGGGATTATCAGAACCTAGTCTACGATTCATCACATTCACTAGAGGGAGGAGAGGCTGCATTGGTAGTTCACTTGGCACTAACATTACCATGATGCTATTTGCTAGACTTCTACAAGGATTTTCATGGAGCTTACTGCCAGGAATAAAAAAAATTGAGTTCTCTAAAACTAATCATGAACTCTCCCTCATGAACCCGTTACAGCTACATGCAAAACCACGTTTATCTAATACTAGGTACCCTAAGGTTATTTGA | 1644 | 38.32 | MEAAFLFISQLAHHYSLIDISKIVIVFVFMAFIFVMFSQHCNLKRKHFIRQQAPLPPGPKPWPIVGCLPAMLLRKNSPTHQWIHSVMKQFNTEIASIRLGNTYIIPITSPQLALEFLKTYDSVFASRSSISNTIHILSRGYLTTAFSSMGDQWKKMRRILLSEVLNPSTLHRMLGQRTGEADTLLHYVFTQTSSNGGGAVINVRNIAQHYCGNIIRRMLFNRRYYGKGKEDGGPTFEEEEHNQALLTILRHVNAFSISDFMPYLKPFDLDGHQKIMKNALNVLRKYDDPIIDERVQQWKKDEKIDGVEDILDILISLKDENANSLLSIEEIKAQITELQIATVDNPSNAVEWAMAELINQPKVLKKAVEELDEVVGKERLVQESDIPKLKYLIACIRESFRLHPFSPFNIPHVSNSDIIVNGYLIPKGSEVLLSRLGLGRNSRIWENPNRFNPKRHLKDETVELGLSEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWSLLPGIKKIEFSKTNHELSLMNPLQLHAKPRLSNTRYPKVI | 547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 26504044 | 26506122 | + | CcPI632755_03g013190.1 | Cco03g1319 | 174678 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco03g1319 | 547 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 26 | 543 | IPR051382 | - | |
| Cco03g1319 | 547 | Gene3D | Cytochrome P450 | 48 | 543 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1319 | 547 | PRINTS | E-class P450 group I signature | 112 | 133 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1319 | 547 | PRINTS | E-class P450 group I signature | 393 | 411 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1319 | 547 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1319 | 547 | PRINTS | E-class P450 group I signature | 350 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1319 | 547 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1319 | 547 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1319 | 547 | PRINTS | E-class P450 group I signature | 434 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1319 | 547 | SUPERFAMILY | Cytochrome P450 | 56 | 537 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1319 | 547 | Pfam | Cytochrome P450 | 56 | 526 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco03g1319 | Cco-Chr3:26504044 | Cco03g1321 | Cco-Chr3:26528300 | 1.50E-251 | dispersed | |
| Cco03g1318 | Cco-Chr3:26471977 | Cco03g1319 | Cco-Chr3:26504044 | 2.20E-241 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco03g1319 | - | - | - | 0.0 |