Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1321 ATGTTTTTCCAACATTGTAACCTCAAAAGAAAACACTTCATCCGACAACAAGCACCTCTTCCACCAGGCCCAAAGCCATGGCCTATTGTTGGGTGCCTCCCAGCAATGTTGTTGAGGAAAAATTCTCCAACACACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATTGCCTCCATACGCCTTGGAAACACTTACATAATCCCTATCACTTCTCCACAACTCGCTTTTGAATTTCTTAAGACCTATGATTCTATCTTTGCATCACGTTCCTCCATTTCTAACACTGTTCATATCTTAAGCAATGGATATGTCACCACAGTTTTTGCATCGATGGGAGACCAATGGAAGAAGATGAGAAGAATTCTTGCATCACAAATACTCAATCCTTCAACTCTCCATCGATTGCTTGGTCATAGAATCGTCGAGGCCGATACTCTTTTACGCTATATTTTCACCCAAACGCGTGATAATGGAGGAGGTTCAACCATAAATGTTAGAAGTATAACACAACATTATTGTGGTAACATTATTAGAAGAATGCTATTCAACAGAAGGTATTATGGGAAAGGGAGGGAAGATGGAGGACCAACTTTTGAAGAAGAAGAGCACAATCAAGCATTGTTAACAATTCTTACTTATGTTCATGCATTTTCTATATCAGATTTCATACCTTGTTTGAAGCCTTTGGATTTAGATGGACATGAAAAAATTATGAAGAAGGCTTTGAATGTCGTCCGAAAGTATGACGAACCCATTATTGATGAAAGAGTACAAAGATGGAAATCAGATGAGAAAATGGAAGGGGTGACGGACGACATTCTTGATATCCTCATTTCACTAAAAGATGAGAATCAAAAATCATTATTGTCAGTAAAAGAGATTAAGGCTCAAATTACGGAGTTACAAATTGCAACAATAGATAATCCTTCAAATGCAGTGGAATGGGCTATGGCAGAGTTGATCAATAAACCAAAAATTCTTGAAAAACCCGTTGAGGAATTAGACAAAGTAGTTGGAAGAGAAAGGTTAGTTCAAGAATCTGATATCCCAAAACTCAAATATCTCACAGCTTGTGCTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAACGTTCCTCACGTTTCCACCTCTGACACCGTTGTGGCCGGTTACTTTATTCCCAAAGGAAGTGAAGTGTTGCTAAGTCGTTTAGGTCTTGGTCGAAACCCAAGGATTTGGGAGGATCCAATGACATTTGATCCAGAACGTCATCTAAAAGATGGGTCAATTGAATTGGGAATTTCAGAACCTGATCTACGATTCATCACCTTTACTAGAGGGAGAAGAAGTTTCATTGGTAGCTCACTTGGGACTAACATTACAATGATGCTATTTGCTAGACTTCTACAAGGGTTTTCATGGAGCTTATTGCCAGGAGTCACAAAGATAGACTTCTCTGAAACAGATGAACGCATTCTCCCAAAGCCATTGCATCTGCATGCAGAACCACGCTTATCTTATATTATGTATCCAACTTATTGA 1536 38.8 MFFQHCNLKRKHFIRQQAPLPPGPKPWPIVGCLPAMLLRKNSPTHQWIHSVMKQFNTEIASIRLGNTYIIPITSPQLAFEFLKTYDSIFASRSSISNTVHILSNGYVTTVFASMGDQWKKMRRILASQILNPSTLHRLLGHRIVEADTLLRYIFTQTRDNGGGSTINVRSITQHYCGNIIRRMLFNRRYYGKGREDGGPTFEEEEHNQALLTILTYVHAFSISDFIPCLKPLDLDGHEKIMKKALNVVRKYDEPIIDERVQRWKSDEKMEGVTDDILDILISLKDENQKSLLSVKEIKAQITELQIATIDNPSNAVEWAMAELINKPKILEKPVEELDKVVGRERLVQESDIPKLKYLTACARESFRLHPFSPFNVPHVSTSDTVVAGYFIPKGSEVLLSRLGLGRNPRIWEDPMTFDPERHLKDGSIELGISEPDLRFITFTRGRRSFIGSSLGTNITMMLFARLLQGFSWSLLPGVTKIDFSETDERILPKPLHLHAEPRLSYIMYPTY 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26528300 26529954 + CcPI632755_03g013210.1 Cco03g1321 174680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1321 511 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1321 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1321 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1321 511 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1321 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1321 511 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1321 511 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 15 504 IPR051382 -
Cco03g1321 511 SUPERFAMILY Cytochrome P450 21 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1321 511 Pfam Cytochrome P450 21 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco03g1321 511 Gene3D Cytochrome P450 13 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1318 Cco-Chr3:26471977 Cco03g1321 Cco-Chr3:26528300 2.30E-225 dispersed
Cco03g1319 Cco-Chr3:26504044 Cco03g1321 Cco-Chr3:26528300 1.50E-251 dispersed
Cco03g1321 Cco-Chr3:26528300 Cco03g1324 Cco-Chr3:26609584 1.20E-223 dispersed
Cco03g1321 Cco-Chr3:26528300 Cco03g1322 Cco-Chr3:26575528 8.60E-36 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1321 - - - 0.0