Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco03g1323 | ATGAAAGCTTTCTTATTCATTAGTCAATTGGCTTATGCATATCAAAATTGTGCAAAAGCAGCCATAGTTAAAACCTTCATATCTATCGTTTTATTCATATCTTCCATTATTATTTCTGTTATTAAGTTCTCTCAATATTACCGCAAAAGAAAGTCCTTAGTCCGGCGGCTACCACCAGGCCCAAAGCCATGGCCCCTCCTCGGCTGTCTTCCAGCAATGTTGAAGAACAAAAACTTGGCAATACACCAATGGATTCATGAAATAATGAAGCAATTCAACACTGAAATTGCTTGCATCCGTCTCGGATCAAATACCCACATAATTCCTGTGGCTTCTCCAGAACTCGCTCTTGAGTTTTTAAAGACACACGATTCTGTTTTTGGATCACGACCCACTTCCATGACTGCGGAGATGTTGAGCCGTGGATATCTAAGTGCAGTTCTTTCACCCACGGGAGATCAATGGAAGAAGATGAGAAGGATCCTGGTTTCTCAAGTACTCAATCCTTCGACTCTCCATGGAATGCTTGGCCAAAGAACAAAGGAAGCTGATACTCTTCTACATTACATTTTCAGCCTCAGCAAAAATGGTGAAGCGGTCAACATAAGAAGCATTGCACAACATTATTGCAGTGGCACTATTAGAAGAATGGTATTCAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGAGGAGCATCTTTTGAAGAAGAGAACCATAATCAAGCATTGTTTACAATTCTAACGCATCTTAATGCATTTTCCATATCAGAATTTATGCCTTGCTTGAAGCCATTCGATCTGAATGGACACGAGAAGATAGTAAAAAGGGCTTTGAAAGTCATAAGAGATCTTGACGAACCCATTATAGAGGAAAGAGTGCAAGAATGGAGAGATGGGAAGAAAAAGGAGGTGGAGGACATTCTTGATATTCTTATCTCACTCAAAAATGAGAATGGTAAATCATTGTTGTCAATAGAAGAGATTAAGGCTCAAGTCACGGAGTTGCAACTTGCAACCATAGATAATCCTTCAAACGCAGTGGAATGGGCAATGGCAGAGTTACTCAATCAACCAAAAATTCTCGAAAACGCTGTTGAAGAATTGGACCAAGTGGTTGGAAGAGATAGGTTGGTTCAAGAATCAGATATACCTAATCTCAAGTATCTCACAGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCATGTTTCTAACGATGACATTGTTGTGGCTGGCTACTTCATCCCTAAAGGTAGCCAAGTTTTGTTATGTCGTCTGGGTCTCGGTCGAAACCCAAGGATATGGAAGGATCCATTGAGATTTGATCCAGAGCGTCATTTAAAAGATGGAACAGTTGAATTAGGAATTTCAGAACCTAGTCTTCGATTCATCACCTTCACTAGAGGAAGGAGGGGTTGCATTGGTTCCTCACTTGGCACTAACATTACTATGATGTTATTTGCTAGACTTCTGCAAGGATTTTCATGGAGCTTATTGTCAGGAATCACAAAGGTAGACTTCTCTAAAACTCAAGAACTCTCTCTACTAGAGCCCTTGCATTTGCATGCAGAACCACGTCTATCTCATAGTATGTACCCAAGGATTACTTTTGTCAACTAG | 1644 | 40.15 | MKAFLFISQLAYAYQNCAKAAIVKTFISIVLFISSIIISVIKFSQYYRKRKSLVRRLPPGPKPWPLLGCLPAMLKNKNLAIHQWIHEIMKQFNTEIACIRLGSNTHIIPVASPELALEFLKTHDSVFGSRPTSMTAEMLSRGYLSAVLSPTGDQWKKMRRILVSQVLNPSTLHGMLGQRTKEADTLLHYIFSLSKNGEAVNIRSIAQHYCSGTIRRMVFNRRYYGKGREDGGASFEEENHNQALFTILTHLNAFSISEFMPCLKPFDLNGHEKIVKRALKVIRDLDEPIIEERVQEWRDGKKKEVEDILDILISLKNENGKSLLSIEEIKAQVTELQLATIDNPSNAVEWAMAELLNQPKILENAVEELDQVVGRDRLVQESDIPNLKYLTACIRESFRLHPFSPFNVPHVSNDDIVVAGYFIPKGSQVLLCRLGLGRNPRIWKDPLRFDPERHLKDGTVELGISEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWSLLSGITKVDFSKTQELSLLEPLHLHAEPRLSHSMYPRITFVN | 547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 26590401 | 26592712 | - | CcPI632755_03g013230.1 | Cco03g1323 | 174682 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco03g1323 | 547 | Pfam | Cytochrome P450 | 58 | 526 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1323 | 547 | Gene3D | Cytochrome P450 | 42 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1323 | 547 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1323 | 547 | PRINTS | E-class P450 group I signature | 481 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1323 | 547 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1323 | 547 | PRINTS | E-class P450 group I signature | 471 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1323 | 547 | PRINTS | E-class P450 group I signature | 209 | 227 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1323 | 547 | PRINTS | E-class P450 group I signature | 115 | 136 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1323 | 547 | PRINTS | E-class P450 group I signature | 391 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1323 | 547 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 34 | 539 | IPR051382 | - | |
| Cco03g1323 | 547 | SUPERFAMILY | Cytochrome P450 | 58 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco03g1127 | Cco-Chr3:21375360 | Cco03g1323 | Cco-Chr3:26590401 | 2.90E-141 | dispersed | |
| Cco03g1315 | Cco-Chr3:26424781 | Cco03g1323 | Cco-Chr3:26590401 | 1.30E-126 | dispersed | |
| Cco03g1316 | Cco-Chr3:26426009 | Cco03g1323 | Cco-Chr3:26590401 | 1.40E-64 | dispersed | |
| Cco03g1323 | Cco-Chr3:26590401 | Cco05g0098 | Cco-Chr5:839160 | 9.70E-70 | dispersed | |
| Cco03g1322 | Cco-Chr3:26575528 | Cco03g1323 | Cco-Chr3:26590401 | 1.90E-28 | tandem | |
| Cco03g1323 | Cco-Chr3:26590401 | Cco03g1324 | Cco-Chr3:26609584 | 2.30E-252 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco03g1323 | - | - | - | 0.0 |