Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco03g1324 | ATGAAAGCTTTGTTATTGATCAGTCAATCATCATATCACAACTCTGTAAAAGCAACCATAGCTATAACCTTCATTGCTATCATTTTATTCATATCTTCCATTATTTATGTTTTTAAGTTTTCTCAACATAACCCCAAAAGAAAGCCCTTAGTACGGCGGCTGCCACCAGGCCCAAAGCCATGGCCTCTCCTCGGCTGCCTTCCAGCAATGTTGTGGAACAAAAACTCGCCAACTCACCTATGGATTCATGCAATAATGAAGCAATTCAACACTGAAATTGCATGTATCCGTCTTGGATCAAATACCCACATAATTCCTGTAACTTCCCCAGAACTCGCTCTTGAATTTCTAAAAACACATGATGTTGTCTTCGGATCACGACCCATTTCAATGACTGCTGAGATATTGAGTCGCGGATATCTCGGTACAGTTCTTTCACCCATGGGAGATCAATGGAGGAAGATGAGAAGGATACTTGTTTCTCAAGTACTCAATCCTTCGACCCTCCATGGAATGCTTGGCCAAAGAACAAAGGAAGCTGATACTCTTCTTCGCTACATTTTCATCCTCACAAGAAACGGAGAAGCCATTGACATAAGAAGCATTACACGACATTATTGCGGTAACATTATTAGAAGAATGATGTTTAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGAGGACCAACTTTTGAAGAAGAAGACCATACTCAAGCATTGCTTACCATTCTTCGGCATGTTAATGCATTTTCTATATCAGATTTCATACCTTTTTTAAAGCCATTGGATTTGGATGGACATGGGAAGATTCTAAAAAATGCTTTGAATTCCATAGAAAGGTATGATGATCCCATTATAGAGGAACGAGTTCAACAATGGAAAGATGGGAAGAAGAAGAAGAAGGTCGAGGAAGACGACATTCTTGATATCCTTCTCTCACTTAAAGATGAGAATGGAAAATCATTGTTGTCAATCCATGAGATTAAGGCCCAAATCATAGAGCTACAAATTGCAACAATAGATAATCCTTCAAATGCAGTGGAATGGGCAATGGCAGAGTTACTCAATCAACAAAAATTTCTCCAAAAAGCTATTGAAGAATTGGACGAAGTAGTTGGAAGAGAAAGGTTGGTTCAAGAATCAGATATCCCAAAACTCAAGTATCTCACAGCTTGTGTAAGGGAATCTTTTCGTCTTCATCCATATTCATCCTTCAATGTTCCTCACGTTTCCAATTCTGACATTGTCGTAGCTGGCTACTTCATCCCAAAAGGTAGCCAAGTTTTGCTATCTCGTCTAGGTCTTGGGCGAAATCCAAGGATTTGGGAGGATCCATTGAGATTTGATCCAGAACGTCATCTAAAAGATGGAACAGTTGAATTGGGAATTTCAGAACCCAATCTTAGATTCATCACCTTCACTAGAGGTAGGAGAGGTTGTATTGGTACCTCACTTGGCACTAACATCACTATCATGTTGTTTGCTAGACTTCTACAAGGATTTTCATGGAGCCTATTGCCAGGAATCACAAAAATAGATTTATCTGAAACTCACGAACTCTCTCTATCAAAGCCATTGCATTTGTATGCAAAACCACGTCTATCTCATAATATGTACCAAAGACTTATTGATCATCAACCATAG | 1647 | 39.16 | MKALLLISQSSYHNSVKATIAITFIAIILFISSIIYVFKFSQHNPKRKPLVRRLPPGPKPWPLLGCLPAMLWNKNSPTHLWIHAIMKQFNTEIACIRLGSNTHIIPVTSPELALEFLKTHDVVFGSRPISMTAEILSRGYLGTVLSPMGDQWRKMRRILVSQVLNPSTLHGMLGQRTKEADTLLRYIFILTRNGEAIDIRSITRHYCGNIIRRMMFNRRYYGKGREDGGPTFEEEDHTQALLTILRHVNAFSISDFIPFLKPLDLDGHGKILKNALNSIERYDDPIIEERVQQWKDGKKKKKVEEDDILDILLSLKDENGKSLLSIHEIKAQIIELQIATIDNPSNAVEWAMAELLNQQKFLQKAIEELDEVVGRERLVQESDIPKLKYLTACVRESFRLHPYSSFNVPHVSNSDIVVAGYFIPKGSQVLLSRLGLGRNPRIWEDPLRFDPERHLKDGTVELGISEPNLRFITFTRGRRGCIGTSLGTNITIMLFARLLQGFSWSLLPGITKIDLSETHELSLSKPLHLYAKPRLSHNMYQRLIDHQP | 548 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 26609584 | 26611422 | - | CcPI632755_03g013240.1 | Cco03g1324 | 174683 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco03g1324 | 548 | SUPERFAMILY | Cytochrome P450 | 55 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1324 | 548 | Coils | Coil | 352 | 372 | - | - | |
| Cco03g1324 | 548 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1324 | 548 | PRINTS | E-class P450 group I signature | 481 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1324 | 548 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1324 | 548 | PRINTS | E-class P450 group I signature | 391 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1324 | 548 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1324 | 548 | PRINTS | E-class P450 group I signature | 471 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1324 | 548 | PRINTS | E-class P450 group I signature | 112 | 133 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1324 | 548 | Gene3D | Cytochrome P450 | 40 | 538 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco03g1324 | 548 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 24 | 540 | IPR051382 | - | |
| Cco03g1324 | 548 | Pfam | Cytochrome P450 | 55 | 525 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco03g1126 | Cco-Chr3:21375005 | Cco03g1324 | Cco-Chr3:26609584 | 3.40E-42 | dispersed | |
| Cco03g1317 | Cco-Chr3:26452685 | Cco03g1324 | Cco-Chr3:26609584 | 5.50E-208 | dispersed | |
| Cco03g1321 | Cco-Chr3:26528300 | Cco03g1324 | Cco-Chr3:26609584 | 1.20E-223 | dispersed | |
| Cco03g1322 | Cco-Chr3:26575528 | Cco03g1324 | Cco-Chr3:26609584 | 4.20E-31 | dispersed | |
| Cco03g1324 | Cco-Chr3:26609584 | Cco05g0098 | Cco-Chr5:839160 | 7.70E-67 | dispersed | |
| Cco03g1323 | Cco-Chr3:26590401 | Cco03g1324 | Cco-Chr3:26609584 | 2.30E-252 | tandem | |
| Cco03g1324 | Cco-Chr3:26609584 | Cco03g1325 | Cco-Chr3:26635986 | 7.30E-41 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco03g1324 | - | - | - | 0.0 |