Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1418 ATGAGGCCTGTCAAACGAGAACCCACCGCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGACGTCCGGCGAAGATAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGGTAGTATGCAATCTGAAGAACAAGACCTCGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGCTTGGGCCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCATTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTGCCATTATGTCACATGAAGTTAATTACAGTCATTTTGTCTGCAGATTCGATTACAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCGAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGACTAGGGCTAAGTGAAACGAAATTGATGGAAATTATGGAAGCAAGAACAAGAAGAGATAAACAAAGACTTGGCTCCAAGCTTGAAGGATCATCATCAATTTCTCCTGTTTTCATTTCAACAGTCAGCAATGGTGTCTGCTGGTCATCGGTTGTCGGTTAG 1383 44.54 MRPVKREPTASSRSNRSRGGGDDGAVDAASLRDIKRERVARVRETSGEDNTTEEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSAIMSHEVNYSHFVCRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQGLGLSETKLMEIMEARTRRDKQRLGSKLEGSSSISPVFISTVSNGVCWSSVVG 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28383200 28386646 + CcPI632755_03g014180.1 Cco03g1418 174777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1418 460 MobiDBLite consensus disorder prediction 208 231 - -
Cco03g1418 460 Pfam Nse4 C-terminal 250 337 IPR014854 -
Cco03g1418 460 MobiDBLite consensus disorder prediction 1 60 - -
Cco03g1418 460 MobiDBLite consensus disorder prediction 28 60 - -
Cco03g1418 460 PANTHER UNCHARACTERIZED 38 377 IPR027786 GO:0005634(PANTHER)|GO:0005634(InterPro)|GO:0006281(InterPro)|GO:0006281(PANTHER)|GO:0030915(InterPro)|GO:0030915(PANTHER)
Cco03g1418 460 MobiDBLite consensus disorder prediction 191 233 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1418 K22825 - csv:101220149 698.738