Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1435 ATGGTACTGGAGCAACTCAGTGATGCAATTCCTGAAGAGATGAAAAGAGTCATGGAATTGGATGTGGCAATGACAGAGGACCTAATTGCGTATAATATTATTCCATTAGATGCTCCTTCTGTAACAAATGCTATTGGGTCCTTGGCTGAGGTGCAAGCAGCAGTGTCAGCTTTGAAGTATTTCAGTGGCCTTCCAAAGTTGCCCGCAGAGTTTTCCATTCCGGAGACCAGGAGTCCTGACATGCTTGACTTTCTACAATTCGTTTTTGGATTTCAGAAAGACAATGTGTCTAATCAGCGTGAGCATGTAGTGCACCTACTTGCCAATGAACAATCTCGACTTTGTATACTTGAAGAAACTGAACCAAAATTGGATGCAGCTGCTGTGGATGGTGTTTTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGTTTGTCTGCTGTTAGCAAGGAAAAGAAGCTATTATTTATTTCCTTATACTTTCTTATATGGGGGGAAGCATCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTTTGGGAGATGGATGAGGTACTGATGCATCAGATTGTGCAGCCGGCCAAGAGCTGTGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTGTCCTCTTTACGAGGTTCTGGCTGCAGAAGCTGCAAACAATAATAATGGGCAGGCACCACATTCTGCATGGAGAAACTATGATGATTTTAATGAGTATTTCTGGTCACTTAGATGTTTTGACCTCATTAGTGAAGATGATCTGAAGAAACTCTTTCAGCCAGAGGAGGGGACTATTCTCAACAAAGCTGAAGAGACCTCCTTCAAACAAATTGATCAGCAGTCCATCCCTAAGCACCTACAATCATTAATACAAGATTGCGACCTGATCTTCGGATCATAA 963 41.33 MVLEQLSDAIPEEMKRVMELDVAMTEDLIAYNIIPLDAPSVTNAIGSLAEVQAAVSALKYFSGLPKLPAEFSIPETRSPDMLDFLQFVFGFQKDNVSNQREHVVHLLANEQSRLCILEETEPKLDAAAVDGVFKKSLENYVKWCEYLCIQPVWSSLSAVSKEKKLLFISLYFLIWGEASNVRFLPECLCYIFHHMVWEMDEVLMHQIVQPAKSCESKDGVSFLDQVICPLYEVLAAEAANNNNGQAPHSAWRNYDDFNEYFWSLRCFDLISEDDLKKLFQPEEGTILNKAEETSFKQIDQQSIPKHLQSLIQDCDLIFGS 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28649245 28666093 + CcPI632755_03g014350.1 Cco03g1435 174794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1435 320 SMART FKS1_dom1_2 162 274 IPR026899 -
Cco03g1435 320 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 164 269 IPR026899 -
Cco03g1435 320 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 28 276 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1435 Cco-Chr3:28649245 Cco03g1442 Cco-Chr3:28791021 4.90E-146 dispersed
Cco03g1433 Cco-Chr3:28555120 Cco03g1435 Cco-Chr3:28649245 3.10E-144 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1435 K11000 - csv:101216435 495.352