Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco03g1436 | ATGGTGCTTTGGCCGTGGCATGATATGCTTGGTAGAAGTCGTCATCAAGGGAAAACGTCATTTGTTGAGCATCGGACTTTTCTTCATCTTTATCATAGTTTCCATCGTTTATGGATATTTTTGGTCATAACGTTTCAGGCTCTGACCATTGTTGCATTTAACAATGGAAGCTTTAATATGAAGACACTGCTGGAAGTACTGAGTCTTGGTCCGACATTTCTTGTAATGAAGTTGATTGAGAGTGTTCTAGACATCCTAATGATGTATGGTGCATACTCTACTCCATGGCGTCTTTTTGTTTCTCGAATTCTTCGTTTTCTTTGGTTTAGTACTGCATCAGCTTCGATAACATTTCTTTATGTGAAAGCTCTTCAGGAGGGGAGTAAACCAAATGCAGAAAGAGTGATGTTCAGACTATATGTAATTGTGATTGGAATATATGGTGGTGTACAGCTTTGTCTCAATATCCTCATGCATATACCTGCTTGCTGTCTTTTAACAAATCAATGTGATTGGTGGCCTCTTGTCCGCTTTTTCAAGTGGATGCGTCAGGAACGTTACTATGTTGGACGTGGGATGTATGAGAGGACTACTGACTTTATCAAGCTCTGGATGTTGATGAGAATATTAGCACATTTGATAACCAAAAGGCTCGGTTAG | 660 | 39.7 | MVLWPWHDMLGRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVITFQALTIVAFNNGSFNMKTLLEVLSLGPTFLVMKLIESVLDILMMYGAYSTPWRLFVSRILRFLWFSTASASITFLYVKALQEGSKPNAERVMFRLYVIVIGIYGGVQLCLNILMHIPACCLLTNQCDWWPLVRFFKWMRQERYYVGRGMYERTTDFIKLWMLMRILAHLITKRLG | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 28671516 | 28674184 | + | CcPI632755_03g014360.1 | Cco03g1436 | 174795 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco03g1436 | 219 | PANTHER | LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 | 13 | 206 | - | GO:0005886(PANTHER)|GO:0046527(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco03g1436 | Cco-Chr3:28671516 | Cco06g1969 | Cco-Chr6:29819166 | 1.00E-49 | dispersed | |
Cco03g1433 | Cco-Chr3:28555120 | Cco03g1436 | Cco-Chr3:28671516 | 9.10E-96 | proximal | |
Cco03g1436 | Cco-Chr3:28671516 | Cco03g1442 | Cco-Chr3:28791021 | 1.60E-95 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco03g1436 | K11000 | - | csv:101216435 | 365.54 |