Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1439 ATGGCCTATGGATATAGTTCAGGTGGTTCATTAGCATACATCCTTGTAACTCTTAACACTTGGTTCATGGCATTATCTTGGCTTTTTGCTCCCTATCTGTTCAATCCATCTGGGTTTGAGTGGCAGAAGACTGTGGAGGATTTCAAGGAATGGACCAATTGGCTCTTTCACCGAGGTGGAGTTGGTGTTAAGGGTGAAGAAAGTTGGGAATCGTGGTGGGACTCAGAACTGGCACATATAAAAACCATTGAAGGGCGGATAGCAGAGACAATTTTAAATCTAAGATTTTTTATTTTTCAATATGGAATTGTTTATAAGCTCCATGCCCAAGGATCAAACACATCATTGTCGGTATATGGCTTCTCCTGGATTGTGTTAGCTTGCCTTATAGTTCTGTACAAGGTGTTTACCTTCAGCCGGAAGATGACTCTCAATTTTCAGCTTTTCTTGCAATTTATCCAAGGTCTTTCTTTCCTTTTGACGCTGGCTGGCTTGGCAGTTGTGGTTGCTATTACGGATTTGTCAATGCCTGATGTATTTGCTTGCATCTTGGCATTTGTACCTACCGGATGGGGCATTCTTTCTATTGCAGTAGCTTGGAAACCTTTAATAAAGAAACTGGGACTCTGGAAATCCATACGCTCAATTGCTCAGTTGTACGATGCTGGGATGGGGATGCTCATCTTTATCCCCATTGCATTCCTTTCATGGTTTCAATTTGTATCGACATTCCAAAATTGTCTTATGTTCAACCATGCTTTCAATTGA 768 41.28 MAYGYSSGGSLAYILVTLNTWFMALSWLFAPYLFNPSGFEWQKTVEDFKEWTNWLFHRGGVGVKGEESWESWWDSELAHIKTIEGRIAETILNLRFFIFQYGIVYKLHAQGSNTSLSVYGFSWIVLACLIVLYKVFTFSRKMTLNFQLFLQFIQGLSFLLTLAGLAVVVAITDLSMPDVFACILAFVPTGWGILSIAVAWKPLIKKLGLWKSIRSIAQLYDAGMGMLIFIPIAFLSWFQFVSTFQNCLMFNHAFN 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28743102 28746306 + CcPI632755_03g014390.1 Cco03g1439 174798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1439 255 Pfam 1,3-beta-glucan synthase component 11 90 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Cco03g1439 255 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 2 254 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1439 Cco-Chr3:28743102 Cco06g1969 Cco-Chr6:29819166 2.10E-99 dispersed
Cco03g1433 Cco-Chr3:28555120 Cco03g1439 Cco-Chr3:28743102 2.50E-130 proximal
Cco03g1439 Cco-Chr3:28743102 Cco03g1447 Cco-Chr3:28860812 7.60E-126 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1439 K11000 - csv:101216435 471.085