Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1444 ATGGGCGATTCTTTGTGCAAAGATGTTCTTCCTCAACTTTCTGAAGAGAGTCCTTTAACATATCCCAAAGGGGAAACAGGCATGTTGAGGCCTCTGTTTTCTAACCATGTCTGCATAGCTTACCTTATCAGTGTTGAACTTGAACGAGGCTTGAGGATGCTTGAGATTAGATCATTAGAAGCCATACATAAACTGTTTAAGCGGTTTCCTGGAGCTTTTATGGACACTCTACATGTTCCTCTCCAAGACAGGCCTACGAATCGGTCATCAAGTCAGGTTGTTGAGAAAGACAAGTTTGATGCTGCTCGATTTTCTCCCTTCTGGAATGAAATCATAGCAAGTTTACGGGAAGAAGATTATATTACAAACTTGGAAATGGAGTTACTTCAAATGCCTAAAAACAATGGTAATCTTCCCATGGTTCAGTGGCCACTTTTTCTTCTTGTCAGCAAGATATTTCTAGCTAAGGATATTGCTGTTAAAAGACGAGATTCGCAAGACAAGCTGTGGAAGCGTATTTCCAGAGATGACTATATGAAATATGCAGTTCAGGAATGTTACCACGCCATTAAGCTTATCTTAACGGAATTACTAGTTGGGGAAGGAAGGATGTGGGTTGAAAGGGTATTTGAAGACATTCAAGCTAGTTTAGCAAACAATTCCATTCTAAATGACTTCCAGCTAAATAAGTTGCCACTTGTGATTACAAGAGTAACGGCTCTAACGGGTATTTTGAAAGAGCCAGAAACTTCGGAGCTGGAAAAAGAGGCTATTAAGGCTGTTCAAGATTTGTATGATGTTGTGCACCATGATCTCCTTTCCAGTGACAAGAGGGGGCACTATGAAACATGGAACATATTAGTAAAAGCCAGAAATGAAGGTCGTTTGTTTACAAAGTTAAATTGGCCCAGAGATTTAGAATTGAAGTCACAAGTCAAAAGATTGTATTCCTTGTTAACCATTAAAAAGACAACTTCAGATATTCCATTTAACTTTGAGGCCCAACGGAGACTGCAATTCTTTACAAATTCACTTTTCATGGTGATGCCAACTCCAAAACTTGTTCGTCAGATGCTTTCCTTCAGGTAG 1089 39.49 MGDSLCKDVLPQLSEESPLTYPKGETGMLRPLFSNHVCIAYLISVELERGLRMLEIRSLEAIHKLFKRFPGAFMDTLHVPLQDRPTNRSSSQVVEKDKFDAARFSPFWNEIIASLREEDYITNLEMELLQMPKNNGNLPMVQWPLFLLVSKIFLAKDIAVKRRDSQDKLWKRISRDDYMKYAVQECYHAIKLILTELLVGEGRMWVERVFEDIQASLANNSILNDFQLNKLPLVITRVTALTGILKEPETSELEKEAIKAVQDLYDVVHHDLLSSDKRGHYETWNILVKARNEGRLFTKLNWPRDLELKSQVKRLYSLLTIKKTTSDIPFNFEAQRRLQFFTNSLFMVMPTPKLVRQMLSFR 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28827245 28834172 + CcPI632755_03g014440.1 Cco03g1444 174803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1444 362 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 54 361 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1444 Cco-Chr3:28827245 Cco06g1969 Cco-Chr6:29819166 2.40E-93 dispersed
Cco03g1437 Cco-Chr3:28717903 Cco03g1444 Cco-Chr3:28827245 3.40E-138 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1444 K11000 - csv:101216435 509.22