Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1447 ATGAGAAATCTTCTCGAGGAATTTGATCATGATCATGGTATTCGTCCTCCTACCATACTGGGTGTCAGGGAACATGTATTTACGGGGAGTGTTTCATCTCTTGCTTCATTCATGTCAAATCAAGAAGCTACTTTTGTGACTCTTGGTCAACGTATTCTGGCAAATCCCTTGAAAGTGCGTATGCATTATGGCCATCCAGATGTTTTTGATAGAGTTTTTCATCTAACACGAGGTGGCATTAGCAAGGCCTCCCGTGTTATCAACATTAGTGAAGATGTCTTTGCAGGATTTAATACAACATTGAGGCAAGGGAACGTTACTCATCATGAGTATATTCAGGTCGGTAAAGGACGAGATGTTGGTCTTAACCAGATTACTCTTTTCGAAAGAAAGGTTGCTGGTGGTAATGGAGAACAAGTTCTTAGCCGAGATGTATACAGGCTTGGCCAACTGTTTGATTTTTTCCGGACGATGTCATTCTATTTCACCACTGTTGGCTACTACTTTTGTACTATGTTAACAGTGCTAACTGTATACATTTTTCTCTATGGAAAAGCATATTTGGCACTATTTGGAGTTGGTGAGACCATTGAAGATAGAGCTAATATTACAAATATTATCACATTGTCAACTACTTTGAATACACAGTTCCTCATCCAAATTGGTATTTGCACTGTCGTGCCGATCTTAGGATTCATATCAGAGCAAGGTTTCTCCAAGACTATTGTCAGCTTCATAACCATGCAGCTTCAGCTTTGTTCTATCTTCTTCACATTCTCTCTTTGCACAAAAACTCACTATTTTGGCCGAACAATTCTTCATGGCGGTGCAAAGTATCAAGCAACTGGAAGGGGATTGGTGGTTCGCCATATCAAATTCTCTGAAAATTACAGATTGTACTCCCGCAGCCATTTTGTTAGAGGATTGGAAGCTGTGCTTCTGTTGGTTGTATATATGGCCTATGGATATAGTTCAGGTGGTTCATTAGCATACATCCTTGTAACTCTTAACAGTTGGTTCATGGCAATATCTTGGCTTTTTGCTCCCTATCTGTTCAATCCATCTGGGTTTGAGTGGCAGAAGACTGTGGAGGATTTCAGGGAATGGACAAATTGGCTCTTTTACCGAGGTGGAGTTGGTGTTAAGGGTGAAGAAAGTTGGGAATCATGGTGGGACTCAGAACTGGCACATATAAAAACCATTGAAGGGCGGATAGCAGAGACAATTTTAAATCTAAGATTCTTTCTTTTTCAATATGGAATTGTTTATAAGCTCCATGCGCAAGGATCAAACACATCAGTGTCGGTATATGGGTTCTCCTGGATTATGTTAGCTTGGCTTATAGTTCTTTTCAAGGTGTTTACCTTCAGCCAGAAGAAGTCGGTCAAATTTCAGTTTTTGTTGCGATTTATCCAAGGTCTTTTCTTCCTTTTGACACTGGCTGTCCTGGCAGTTGCATTTGCCATTACGGATTTGTCAATGTTTGATGCACTTGCTTGCATCTTGGCATTTGTACCTACAGGATGGGGCATTCTTTCTATTGCAGTAGCTTGGAAACCTTTAATAAAGAAACTTGGACTCTGGAAATCCATTTGCTCAATTGCTCGGCTGTACGATGCCGGGATGGGGATGCTCATCTTTACCCCCATTGCATTCCTTTCATGGCTTCCATTTGTATCAACATTCCAAAATTTTCTTATGTTCAACCAGGCTTTCAGTCGAGGGCTCGAGATCTGTCTAACTCTTGCTGGAAAAAAACCCAACACTGCCCTATGA 1776 40.88 MRNLLEEFDHDHGIRPPTILGVREHVFTGSVSSLASFMSNQEATFVTLGQRILANPLKVRMHYGHPDVFDRVFHLTRGGISKASRVINISEDVFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQITLFERKVAGGNGEQVLSRDVYRLGQLFDFFRTMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLALFGVGETIEDRANITNIITLSTTLNTQFLIQIGICTVVPILGFISEQGFSKTIVSFITMQLQLCSIFFTFSLCTKTHYFGRTILHGGAKYQATGRGLVVRHIKFSENYRLYSRSHFVRGLEAVLLLVVYMAYGYSSGGSLAYILVTLNSWFMAISWLFAPYLFNPSGFEWQKTVEDFREWTNWLFYRGGVGVKGEESWESWWDSELAHIKTIEGRIAETILNLRFFLFQYGIVYKLHAQGSNTSVSVYGFSWIMLAWLIVLFKVFTFSQKKSVKFQFLLRFIQGLFFLLTLAVLAVAFAITDLSMFDALACILAFVPTGWGILSIAVAWKPLIKKLGLWKSICSIARLYDAGMGMLIFTPIAFLSWLPFVSTFQNFLMFNQAFSRGLEICLTLAGKKPNTAL 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28860812 28869202 + CcPI632755_03g014470.1 Cco03g1447 174806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1447 591 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 586 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Cco03g1447 591 Pfam 1,3-beta-glucan synthase component 10 411 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1447 Cco-Chr3:28860812 Cco06g1969 Cco-Chr6:29819166 1.30E-253 dispersed
Cco03g1439 Cco-Chr3:28743102 Cco03g1447 Cco-Chr3:28860812 7.60E-126 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1447 K11000 - csv:101216435 1044.65