Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco03g1459 | ATGTTCGGGATGGCGGCGGAGGCAGTGACGACCGTGGCGGTCGTGGCAGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGAGTTGGAGGAGGAAAATATACTTGGACAACTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTATTTTGGGTTCGATAAACATATCTACAACGTGTTGGAAGTGAGCAAAACGAGCTACGAGAGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATACTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGGACTCTCCTCCCATTTCACCACCAAATTTACCCAATATTTCTCCATCTTTACATCCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAATATTTCCATGGCTAATTCCTTCTTCTAA | 513 | 41.91 | MFGMAAEAVTTVAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVSKTSYESCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEDSPPISPPNLPNISPSLHPLIWPFSLLLSINISMANSFF | 170 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 29164564 | 29165683 | - | CcPI632755_03g014590.1 | Cco03g1459 | 174818 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco03g1459 | 170 | FunFam | Lamin-like protein | 29 | 132 | - | - | |
Cco03g1459 | 170 | SUPERFAMILY | Cupredoxins | 32 | 129 | IPR008972 | - | |
Cco03g1459 | 170 | Gene3D | - | 31 | 134 | IPR008972 | - | |
Cco03g1459 | 170 | PANTHER | BLUE COPPER PROTEIN | 17 | 130 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Cco03g1459 | 170 | ProSiteProfiles | Phytocyanin domain profile. | 31 | 131 | IPR003245 | GO:0009055(InterPro) | |
Cco03g1459 | 170 | Pfam | Plastocyanin-like domain | 42 | 123 | IPR003245 | GO:0009055(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco03g1459 | Cco-Chr3:29164564 | Cco10g1540 | Cco-Chr10:28628179 | 2.90E-36 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco03g1459 | - | - | - | 0.0 |