Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1459 ATGTTCGGGATGGCGGCGGAGGCAGTGACGACCGTGGCGGTCGTGGCAGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGAGTTGGAGGAGGAAAATATACTTGGACAACTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTATTTTGGGTTCGATAAACATATCTACAACGTGTTGGAAGTGAGCAAAACGAGCTACGAGAGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATACTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGGACTCTCCTCCCATTTCACCACCAAATTTACCCAATATTTCTCCATCTTTACATCCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAATATTTCCATGGCTAATTCCTTCTTCTAA 513 41.91 MFGMAAEAVTTVAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVSKTSYESCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEDSPPISPPNLPNISPSLHPLIWPFSLLLSINISMANSFF 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29164564 29165683 - CcPI632755_03g014590.1 Cco03g1459 174818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1459 170 FunFam Lamin-like protein 29 132 - -
Cco03g1459 170 SUPERFAMILY Cupredoxins 32 129 IPR008972 -
Cco03g1459 170 Gene3D - 31 134 IPR008972 -
Cco03g1459 170 PANTHER BLUE COPPER PROTEIN 17 130 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cco03g1459 170 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055(InterPro)
Cco03g1459 170 Pfam Plastocyanin-like domain 42 123 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1459 Cco-Chr3:29164564 Cco10g1540 Cco-Chr10:28628179 2.90E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1459 - - - 0.0