Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1466 ATGTTCCCCTTGGTACATAGAGACGGGCAAGGATGGACAAAGTGGGGTAAAAGTACAGGTTTCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTGCTTTGTAAAATCATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGCCGCCGACGAGTCGTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCGACCTCTTTCCTCGCCGCCGCCGCCGCCAGCTGCCGCTCCTCCTCCTCCCTCCAGAAGAAGGGATAGAGATGAGAGGGATAGGAGAGACGACCGGGATATTGATCGTCCTCCGAATCGACGCGGCGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGGAGACACTCGCCTCCCAGACGGTCTCCTCCCCCACCTTACAAGCGTTCCAGGAGAGATGATGGTGGGTATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGTTATGATTATGGTGGGGGATATGAACGGGAAATGCGAGGCCGACCTGGATATGTTGATGAAAGGCCTCTAGGTCGGTACATTGGTCGTTCATCTGGTGGCTATCAAGATTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGAGAAGGCTTGATGACATATAAGCAATTTATTCAAGAACTTGAAGATGACATACTACCTGCCGAAGCTGAGCGCAGATATCAAGAATACAAGTCAGAGTATATTACAACGCAGAAACAAGCTTTTTTTGATTCTCATAAGGATGAAGAATGGTTGAGAGACAAATATCATCCGACCAACCTCGTTACTGTCATTGAAAGGAGGAACGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGCTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGTAGGCGTCATGGTAGAGGACCGGCAAAAGAAATGGATCTTCTTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACCAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCTCTTGTCCGTAAACTTGATTCTGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGACAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGCCCAGTCATAATCATACGGGGGCTGACAACTGTCAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGTATCCATGGTCTAGATTACTATGGAATGGTTGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAACTCTAACATGGCTGGTGGTGCGGATGAGTGGGAGAAGAAACTTGACTTACGTTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAAGATAAAATAGAGGCTGCTGCTCTTGAAGCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCTCCCGAGTTTGTACATAAGCATCTTAACTTGAAACATCCAGAGCTTGTGATGGAGCTGACTTCAAAAGTGCGTGAAGAGCTGTATTTCCAAAATTACATGAAGGACGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCACTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGCGATAATTGGGCAAATGGGGGCGGCAGATTTGATAGATCTGAGAACCCACAATCAACTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGGAACATTGATGATCCTATGTTTGATACTTTTGCTGGACAAGGAAGACATGTTGCTCCTTTTGCTTCTGAAATACCACCGCCAGTGCTTATGCCGGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCGATGAGAATGTTGCGGGAACAAGGAGGTCCACCTCCTTTTGAGGGTGGTGGAAGAAATGGAAGGCCAGGACCTCAATTAGGTGGATCTGCTCCAATCCTTGCCCTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGATGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAG 2373 47.91 MFPLVHRDGQGWTKWGKSTGFASSSSSSSSSLLCKIMAEVMNMAAAAAADESLDRRRDRQEKSSEERPLSSPPPPPAAAPPPPSRRRDRDERDRRDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPLGRYIGRSSGGYQDWDSSRGGHGDALNAGGGQREGLMTYKQFIQELEDDILPAEAERRYQEYKSEYITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMKDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGGRFDRSENPQSTDFQSANDGTDGGNIDDPMFDTFAGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILALSSGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29265858 29272899 + CcPI632755_03g014660.1 Cco03g1466 174825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1466 790 MobiDBLite consensus disorder prediction 1 31 - -
Cco03g1466 790 MobiDBLite consensus disorder prediction 47 189 - -
Cco03g1466 790 MobiDBLite consensus disorder prediction 654 672 - -
Cco03g1466 790 Pfam Arsenite-resistance protein 2 491 693 IPR007042 -
Cco03g1466 790 PANTHER ARSENITE-RESISTANCE PROTEIN 2 383 786 IPR039727 GO:0006397(InterPro)|GO:0016604(PANTHER)|GO:0031053(PANTHER)
Cco03g1466 790 MobiDBLite consensus disorder prediction 16 31 - -
Cco03g1466 790 MobiDBLite consensus disorder prediction 619 650 - -
Cco03g1466 790 MobiDBLite consensus disorder prediction 50 66 - -
Cco03g1466 790 ProSitePatterns Zinc finger C2H2 type domain signature. 557 580 IPR013087 -
Cco03g1466 790 MobiDBLite consensus disorder prediction 83 174 - -
Cco03g1466 790 MobiDBLite consensus disorder prediction 735 755 - -
Cco03g1466 790 MobiDBLite consensus disorder prediction 356 373 - -
Cco03g1466 790 MobiDBLite consensus disorder prediction 603 680 - -
Cco03g1466 790 MobiDBLite consensus disorder prediction 336 393 - -
Cco03g1466 790 Pfam SERRATE/Ars2, N-terminal domain 252 332 IPR021933 -
Cco03g1466 790 MobiDBLite consensus disorder prediction 68 82 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1466 K27103 - csv:101219335 1182.93