Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1531 ATGGGGAGAGAACTGCAGAAGCAGCCGCAGCAAGAGATGGCCTCCGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCCGACATTCTCCCCGATCTCGAAAACTACGTAAACGAGCAGGTGTCGTCAGAAACGTACAGTTTAGATGCCAATCTATGCCTTCTTCGCCTTTACCAGTTTGAGCCCGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGCTTTGATGGCAATGCCAGCTCCGGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTCTGGGATGAAGCTGCCAAGAACCGTCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAGGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCAGAGGCAATCAATATTGAGGGCCTGTCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGATTGGATTCTTGAGAAAGGTCATGGGAAGGGCCAACTTATTGTTATACCACCCAATGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGATAGCATTCCCTTGGATCACATTACTCGCATCTTTCCAATTCTTGGCTAA 699 45.78 MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSDWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLDHITRIFPILG 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29910905 29913583 - CcPI632755_03g015310.1 Cco03g1531 174890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1531 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 11 229 IPR009374 GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005737(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)
Cco03g1531 232 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 8 232 IPR009374 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Cco03g1531 232 FunFam Eukaryotic translation initiation factor 3 subunit K 128 231 - -
Cco03g1531 232 Gene3D ARM repeat; domain 1 8 125 IPR016020 GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006446(InterPro)|GO:0043022(InterPro)
Cco03g1531 232 SUPERFAMILY Winged helix DNA-binding domain 137 229 IPR036390 -
Cco03g1531 232 ProSiteProfiles PCI domain profile. 47 206 IPR000717 -
Cco03g1531 232 Pfam CSN8/PSMD8/EIF3K family 67 191 IPR033464 -
Cco03g1531 232 FunFam Eukaryotic translation initiation factor 3 subunit K 9 125 - -
Cco03g1531 232 SUPERFAMILY ARM repeat 10 135 IPR016024 -
Cco03g1531 232 Gene3D - 128 230 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1531 K15028 - csv:101214255 451.055