Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1557 ATGGAGTCCATGGCTTCTCATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCCTTCTGTCTTTGTCGATGCCAAGAAAACTTACATTGTTCGTATGAAACATAATGCTCTGCCATCAGAGTATCTCACCCACCATGACTGGTACTCCGCTCATCTTCAATCTCTATCTTCATCTTCAACCTCCGATTCCCTTCTCTACACTTACACTTCCGCCTACCATGGCTTCGCTGCTTCTCTGGATTCAAACGAAGTAGAATTGCTCCGCCAATCCGATTCAGTTTTGGGTGTCTACGAAGACTCTGTTTACAATCTTCACACCACTCGCACTCCGGGATTCCTCGGTCTCAACTCCGATTTTGGGTTATGGGAAGGTCACAACACTCAGGATCTTAATCAAGCTTCTCACGATGTCATCATTGGGGTTCTCGATACTGGGATTTGGCCGGAATCGAAGAGCTTTGATGACACTGGAATGCCGGACATCCCATCACGGTGGCGTGGAGAATGTGAATCAGGACCCGATTTCAATCCTTCTCTCTGTAACAAGAAACTAATCGGAGCTCGTAGCTTCTCCAAGGGTTATCAAATGGCTTCCGGTGGTGGGTATTTCAGAAAACCTAGAGAAAACGAGTCGCCTCGAGATCAAGACGGACATGGAACGCACACAGCGAGCACAGCTGCTGGTTCACATGTGGCTAACGCGAGCTTACTTGGTTATGCAAGAGGCATTGCTAGAGGAATGGCTCCTCAAGCAAGAGTTGCTGCTTACAAGACTTGTTGGCCTACTGGTTGCTTCGGATCTGACATTCTCGCCGGTATGGATCGAGCGATATCCGACGGCGTCGATGTACTTTCACTCTCTTTAGGTGGTGGCTCTGCTCCGTATTACAGAGATACCATAGCAATCGGAGCATTTGCAGCCATGGAGAAGGGGGTTTTTGTTTCTTGCTCAGCTGGGAATAGTGGACCGAATAAGGCTTCTCTAGCCAATGTAGCACCGTGGATCATGACGGTCGGAGCCGGAACGCTCGATCGGGACTTCCCAGCTTATGTCCAGCTTGGAAATGGTAAACGCTTCACTGGAGTGTCGCTTTACAGTGGTCAAGGAATGGGGAATAAGGCAGTGGAATTGGTATACAACAAAGGAAGCAACACCTCCAGCAACATGTGCTTGCCGGGATCTCTCGACCCGGCGGTGGTTCGAGGGAAAGTGGTGGTTTGCGACAGAGGAATCAACGCTAGAGTAGAAAAGGGAGGAGTGGTGCGAGATGCAGGTGGGATTGGGATGATTCTTGCGAACACAGCAGCTAGTGGGGAGGAATTGGTGGCTGATAGTCACTTGCTGCCAGCCGTGGCGGTCGGGCAGAAAACTGGCGACTTGATCCGACGCTATGTTCGGTCAGCTTCGAATCCAACGGCGGTGCTGAGCTTTGGTGGGACAATTCTGAATGTCCGCCCATCTCCGGTGGTGGCGGCGTTTAGTTCTAGAGGACCCAACTTGGTAACTCCCCAAATCTTAAAGCCGGATGTTATTGGTCCTGGCGTTAACATCCTGGCTGCTTGGTCCGAGTCCATTGGACCTACCGGATTGGACAATGACAAAAGGAAAACTCAGTTCAATATCATGTCAGGAACTTCCATGTCTTGCCCACATATAAGTGGGTTGGCTGCATTGCTAAAGGCAGCTCATCCACAATGGAGTCCAAGTGCAATCAAATCCGCGTTAATGACAACCGCATACACACAGGACAACACCAACTCATCGCTCCGTGATGCAGCCGGAGGGGCGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCTCTATCCCCTGGCCTTCTATACGATATCTCGACTGATGATTACATTGCCTTCTTGTGCTCATTGGACTATGGGATCGATCATGTTCAAGCGATTGTGAAACGTTCGAACATAACTTGCTCTAGAAAGTTTGCTGATCCAGGACAACTTAACTACCCTTCGTTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGGTACACTCGTATCGTCACCAATGTTGGCGCTGCAGGGTCGGTTTACGAAGTGGCTACTACTGCACCGTCTGTTGTGAAGGTGACTGTGAAACCTTCAAAACTTGTGTTCACTAAAGTTGGGGAGAGGAAGAGGTACACGGTTACTTTCGTGGCGAGTAGGGACGCTGCTCAAACGACGAGATTTGGGTTCGGTTCGATTGCGTGGAGCAATGACCAACACCAAGTTAGAAGCCCAGTGGCATTCGCTTGGACAAGGTTGTGA 2301 49.5 MESMASHFLLLLLLLLLLIPSVFVDAKKTYIVRMKHNALPSEYLTHHDWYSAHLQSLSSSSTSDSLLYTYTSAYHGFAASLDSNEVELLRQSDSVLGVYEDSVYNLHTTRTPGFLGLNSDFGLWEGHNTQDLNQASHDVIIGVLDTGIWPESKSFDDTGMPDIPSRWRGECESGPDFNPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKAVELVYNKGSNTSSNMCLPGSLDPAVVRGKVVVCDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGQKTGDLIRRYVRSASNPTAVLSFGGTILNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDNDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLLYDISTDDYIAFLCSLDYGIDHVQAIVKRSNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYEVATTAPSVVKVTVKPSKLVFTKVGERKRYTVTFVASRDAAQTTRFGFGSIAWSNDQHQVRSPVAFAWTRL 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30197602 30199983 - CcPI632755_03g015570.1 Cco03g1557 174916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1557 766 Gene3D - 633 763 - -
Cco03g1557 766 Pfam PA domain 378 462 IPR003137 -
Cco03g1557 766 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Cco03g1557 766 CDD PA_subtilisin_like 352 475 - -
Cco03g1557 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Cco03g1557 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 759 IPR045051 -
Cco03g1557 766 Pfam Subtilase family 137 586 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco03g1557 766 SUPERFAMILY Subtilisin-like 106 620 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco03g1557 766 Gene3D Peptidase S8/S53 domain 138 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco03g1557 766 Pfam Fibronectin type-III domain 663 760 IPR041469 -
Cco03g1557 766 CDD Peptidases_S8_3 104 582 IPR034197 -
Cco03g1557 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 107 IPR037045 -
Cco03g1557 766 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Cco03g1557 766 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Cco03g1557 766 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cco03g1557 766 FunFam subtilisin-like protease SBT1.5 346 484 - -
Cco03g1557 766 FunFam Subtilisin-like protease SBT1.5 633 764 - -
Cco03g1557 766 FunFam Subtilisin-like protease SBT1.9 20 107 - -
Cco03g1557 766 Gene3D - 346 484 - -
Cco03g1557 766 ProSiteProfiles Serine proteases, subtilase domain profile. 120 616 - -
Cco03g1557 766 SUPERFAMILY Protease propeptides/inhibitors 28 105 - -
Cco03g1557 766 FunFam Subtilisin-like protease SBT1.5 138 357 - -
Cco03g1557 766 MobiDBLite consensus disorder prediction 200 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1557 Cco-Chr3:30197602 Cco04g1491 Cco-Chr4:30320425 9.60E-233 dispersed
Cco07g0138 Cco-Chr7:1442141 Cco03g1557 Cco-Chr3:30197602 3.10E-186 transposed
Cco08g1831 Cco-Chr8:29337385 Cco03g1557 Cco-Chr3:30197602 3.80E-144 transposed
Cco03g1557 Cco-Chr3:30197602 Cco09g0103 Cco-Chr9:902807 5.70E-217 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1557 - - - 0.0