Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco03g1557 | ATGGAGTCCATGGCTTCTCATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCCTTCTGTCTTTGTCGATGCCAAGAAAACTTACATTGTTCGTATGAAACATAATGCTCTGCCATCAGAGTATCTCACCCACCATGACTGGTACTCCGCTCATCTTCAATCTCTATCTTCATCTTCAACCTCCGATTCCCTTCTCTACACTTACACTTCCGCCTACCATGGCTTCGCTGCTTCTCTGGATTCAAACGAAGTAGAATTGCTCCGCCAATCCGATTCAGTTTTGGGTGTCTACGAAGACTCTGTTTACAATCTTCACACCACTCGCACTCCGGGATTCCTCGGTCTCAACTCCGATTTTGGGTTATGGGAAGGTCACAACACTCAGGATCTTAATCAAGCTTCTCACGATGTCATCATTGGGGTTCTCGATACTGGGATTTGGCCGGAATCGAAGAGCTTTGATGACACTGGAATGCCGGACATCCCATCACGGTGGCGTGGAGAATGTGAATCAGGACCCGATTTCAATCCTTCTCTCTGTAACAAGAAACTAATCGGAGCTCGTAGCTTCTCCAAGGGTTATCAAATGGCTTCCGGTGGTGGGTATTTCAGAAAACCTAGAGAAAACGAGTCGCCTCGAGATCAAGACGGACATGGAACGCACACAGCGAGCACAGCTGCTGGTTCACATGTGGCTAACGCGAGCTTACTTGGTTATGCAAGAGGCATTGCTAGAGGAATGGCTCCTCAAGCAAGAGTTGCTGCTTACAAGACTTGTTGGCCTACTGGTTGCTTCGGATCTGACATTCTCGCCGGTATGGATCGAGCGATATCCGACGGCGTCGATGTACTTTCACTCTCTTTAGGTGGTGGCTCTGCTCCGTATTACAGAGATACCATAGCAATCGGAGCATTTGCAGCCATGGAGAAGGGGGTTTTTGTTTCTTGCTCAGCTGGGAATAGTGGACCGAATAAGGCTTCTCTAGCCAATGTAGCACCGTGGATCATGACGGTCGGAGCCGGAACGCTCGATCGGGACTTCCCAGCTTATGTCCAGCTTGGAAATGGTAAACGCTTCACTGGAGTGTCGCTTTACAGTGGTCAAGGAATGGGGAATAAGGCAGTGGAATTGGTATACAACAAAGGAAGCAACACCTCCAGCAACATGTGCTTGCCGGGATCTCTCGACCCGGCGGTGGTTCGAGGGAAAGTGGTGGTTTGCGACAGAGGAATCAACGCTAGAGTAGAAAAGGGAGGAGTGGTGCGAGATGCAGGTGGGATTGGGATGATTCTTGCGAACACAGCAGCTAGTGGGGAGGAATTGGTGGCTGATAGTCACTTGCTGCCAGCCGTGGCGGTCGGGCAGAAAACTGGCGACTTGATCCGACGCTATGTTCGGTCAGCTTCGAATCCAACGGCGGTGCTGAGCTTTGGTGGGACAATTCTGAATGTCCGCCCATCTCCGGTGGTGGCGGCGTTTAGTTCTAGAGGACCCAACTTGGTAACTCCCCAAATCTTAAAGCCGGATGTTATTGGTCCTGGCGTTAACATCCTGGCTGCTTGGTCCGAGTCCATTGGACCTACCGGATTGGACAATGACAAAAGGAAAACTCAGTTCAATATCATGTCAGGAACTTCCATGTCTTGCCCACATATAAGTGGGTTGGCTGCATTGCTAAAGGCAGCTCATCCACAATGGAGTCCAAGTGCAATCAAATCCGCGTTAATGACAACCGCATACACACAGGACAACACCAACTCATCGCTCCGTGATGCAGCCGGAGGGGCGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCTCTATCCCCTGGCCTTCTATACGATATCTCGACTGATGATTACATTGCCTTCTTGTGCTCATTGGACTATGGGATCGATCATGTTCAAGCGATTGTGAAACGTTCGAACATAACTTGCTCTAGAAAGTTTGCTGATCCAGGACAACTTAACTACCCTTCGTTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGGTACACTCGTATCGTCACCAATGTTGGCGCTGCAGGGTCGGTTTACGAAGTGGCTACTACTGCACCGTCTGTTGTGAAGGTGACTGTGAAACCTTCAAAACTTGTGTTCACTAAAGTTGGGGAGAGGAAGAGGTACACGGTTACTTTCGTGGCGAGTAGGGACGCTGCTCAAACGACGAGATTTGGGTTCGGTTCGATTGCGTGGAGCAATGACCAACACCAAGTTAGAAGCCCAGTGGCATTCGCTTGGACAAGGTTGTGA | 2301 | 49.5 | MESMASHFLLLLLLLLLLIPSVFVDAKKTYIVRMKHNALPSEYLTHHDWYSAHLQSLSSSSTSDSLLYTYTSAYHGFAASLDSNEVELLRQSDSVLGVYEDSVYNLHTTRTPGFLGLNSDFGLWEGHNTQDLNQASHDVIIGVLDTGIWPESKSFDDTGMPDIPSRWRGECESGPDFNPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKAVELVYNKGSNTSSNMCLPGSLDPAVVRGKVVVCDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGQKTGDLIRRYVRSASNPTAVLSFGGTILNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDNDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLLYDISTDDYIAFLCSLDYGIDHVQAIVKRSNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYEVATTAPSVVKVTVKPSKLVFTKVGERKRYTVTFVASRDAAQTTRFGFGSIAWSNDQHQVRSPVAFAWTRL | 766 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 30197602 | 30199983 | - | CcPI632755_03g015570.1 | Cco03g1557 | 174916 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco03g1557 | 766 | Gene3D | - | 633 | 763 | - | - | |
Cco03g1557 | 766 | Pfam | PA domain | 378 | 462 | IPR003137 | - | |
Cco03g1557 | 766 | Pfam | Peptidase inhibitor I9 | 29 | 107 | IPR010259 | - | |
Cco03g1557 | 766 | CDD | PA_subtilisin_like | 352 | 475 | - | - | |
Cco03g1557 | 766 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 546 | 556 | IPR023828 | - | |
Cco03g1557 | 766 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 29 | 759 | IPR045051 | - | |
Cco03g1557 | 766 | Pfam | Subtilase family | 137 | 586 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco03g1557 | 766 | SUPERFAMILY | Subtilisin-like | 106 | 620 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco03g1557 | 766 | Gene3D | Peptidase S8/S53 domain | 138 | 629 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco03g1557 | 766 | Pfam | Fibronectin type-III domain | 663 | 760 | IPR041469 | - | |
Cco03g1557 | 766 | CDD | Peptidases_S8_3 | 104 | 582 | IPR034197 | - | |
Cco03g1557 | 766 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 23 | 107 | IPR037045 | - | |
Cco03g1557 | 766 | PRINTS | Subtilisin serine protease family (S8) signature | 545 | 561 | IPR015500 | - | |
Cco03g1557 | 766 | PRINTS | Subtilisin serine protease family (S8) signature | 136 | 155 | IPR015500 | - | |
Cco03g1557 | 766 | PRINTS | Subtilisin serine protease family (S8) signature | 216 | 229 | IPR015500 | - | |
Cco03g1557 | 766 | FunFam | subtilisin-like protease SBT1.5 | 346 | 484 | - | - | |
Cco03g1557 | 766 | FunFam | Subtilisin-like protease SBT1.5 | 633 | 764 | - | - | |
Cco03g1557 | 766 | FunFam | Subtilisin-like protease SBT1.9 | 20 | 107 | - | - | |
Cco03g1557 | 766 | Gene3D | - | 346 | 484 | - | - | |
Cco03g1557 | 766 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 120 | 616 | - | - | |
Cco03g1557 | 766 | SUPERFAMILY | Protease propeptides/inhibitors | 28 | 105 | - | - | |
Cco03g1557 | 766 | FunFam | Subtilisin-like protease SBT1.5 | 138 | 357 | - | - | |
Cco03g1557 | 766 | MobiDBLite | consensus disorder prediction | 200 | 227 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco03g1557 | Cco-Chr3:30197602 | Cco04g1491 | Cco-Chr4:30320425 | 9.60E-233 | dispersed | |
Cco07g0138 | Cco-Chr7:1442141 | Cco03g1557 | Cco-Chr3:30197602 | 3.10E-186 | transposed | |
Cco08g1831 | Cco-Chr8:29337385 | Cco03g1557 | Cco-Chr3:30197602 | 3.80E-144 | transposed | |
Cco03g1557 | Cco-Chr3:30197602 | Cco09g0103 | Cco-Chr9:902807 | 5.70E-217 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco03g1557 | - | - | - | 0.0 |