Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1722 ATGATGGCTGGGACTAATCAAATCAATCTCAACGAGGCTAGGATGGTGGTTCCACTAAATACCTGGGTTCTCATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGACCTGATGGGACCTTCAATCGGCATTTGGCAGAGTTTCTCGACAGAAAAGTCCCGGCGAATGCTAACCCGGTTGACGGGACTTTCTCCTTTGATGTCATTATCGATCGTGCTACGAGTCTGCTTTGTAGAATTTATCGACCAGCCAACGGAGGGGAACCTCAGACTACTAACATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGTTCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCGCATTCGTCTGCTAACAGTGCTATCTATGATACACTATGCCGTCGATTGGTGAGCCTTTGCAAGGCTGTTGTTGTCTCTGTGAACTACCGTCGTGCACCTGAAAATCGGTATCCATGTGCTTATGATGATGGATGGACTGCACTTAATTGGGTAAATTCAAGATCATGGCTCCAAAGTAAAGACTCCAAAACGTATATTTATTTGGCTGGCGATAGTTCGGGTGGAAACATCGTACACCATGTTGCATCAAGAGCAGTGAGGTCTGGAATCGAAGTATTGGGTAATATACTTCTCAATCCAATGTTTGGAGGACAGGAAAGAACTAAATCTGAGATTCGATTGGATGGAAAGTATTTCGTCACCATCCGGGACAGAGATTGGTATTGGAGGGCCTTCCTCCCTGAAGGAGAAGATAGAGATCATCCAGCATGTAATCCCTTTGGCCCGAGGGGCAATAGCCTCGAAGGAATCAAATTCCCGAAAAGCCTTGTTGTGGTGGCTGGTTTAGATCTTGTCCAAGATTGGCAATTGGCTTATGCCAAAGGGCTGGAGAAGGATGGCCAAGAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTGCTACCAAATACCGAGCACTTCTATACCGTCATGGACGAGATAAGTGAATTTGTGAGTTCTGACTGTTAA 1041 44.96 MMAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGTFSFDVIIDRATSLLCRIYRPANGGEPQTTNIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVVSVNYRRAPENRYPCAYDDGWTALNWVNSRSWLQSKDSKTYIYLAGDSSGGNIVHHVASRAVRSGIEVLGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGNSLEGIKFPKSLVVVAGLDLVQDWQLAYAKGLEKDGQEVKLLYLEQATIGFYLLPNTEHFYTVMDEISEFVSSDC 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31941257 31942808 + CcPI632755_03g017220.1 Cco03g1722 175081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1722 346 PANTHER ARYLACETAMIDE DEACETYLASE 37 336 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Cco03g1722 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787(InterPro)
Cco03g1722 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787(InterPro)
Cco03g1722 346 FunFam Gibberellin receptor GID1 2 344 - -
Cco03g1722 346 Gene3D alpha/beta hydrolase 1 344 IPR029058 -
Cco03g1722 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Cco03g1722 346 SUPERFAMILY alpha/beta-Hydrolases 57 342 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1722 Cco-Chr3:31941257 Cco09g0632 Cco-Chr9:5584189 1.20E-150 dispersed
Cco03g1722 Cco-Chr3:31941257 Cco02g2556 Cco-Chr2:37895243 9.30E-42 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1722 K14493 - csv:101213253 654.055