Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1782 ATGGCTGGTAAAGTTCAAATTCCTACCAAAAACTCAGCGCTTATTTCTATGATTGCTGATGAGGATACGGTCGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCAAAGACAACTGTTAAACAAATTGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCCAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCAATATTGGAGATTCCTTCCAAGGATCATCCATATGACCCTGCACATGATTCAGTTCTTTCGCGAGTAAAGAACCTATTTTCTACCGAATCGGTGGCATCTGGGAGGCGTTAA 393 39.69 MAGKVQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTESVASGRR 130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32511370 32514469 + CcPI632755_03g017820.1 Cco03g1782 175141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1782 130 PIRSF V-ATP_synth_F 4 123 IPR005772 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cco03g1782 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220(InterPro)
Cco03g1782 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220(InterPro)|GO:0046961(InterPro)
Cco03g1782 130 SUPERFAMILY AtpF-like 15 118 IPR036906 GO:0034220(InterPro)
Cco03g1782 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 126 - GO:0016020(PANTHER)
Cco03g1782 130 FunFam V-type proton ATPase subunit F 9 122 - -
Cco03g1782 130 NCBIfam V-type ATPase subunit F 11 124 IPR005772 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1782 K02151 - csv:101215239 250.366