Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g1862 ATGACGGACGAGCGCGGGTTTGTGTGGTGGTGGCTGGTATTGGCGTTTGGGATCCGACGGTCAGAAACCGCTTGTGACATCTGGTGCTTTACCCGCTGGAGCAGAGCCATGCGAAAGCCTTTGCTCCTTCTCTTTCTCTTATCACTGGCTTTTACCAAATGGGTTCATGCCTTTCTCCCCTATAACCTCTCTGATTCTTCTCTCTTCGACTCTTATGAAACCTCCTTTGCTGCTACCCTTAAACCTCTCATGGTGCCTCTCACTCTCATTCATGGAGCAGATGCAGAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTACATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATTAGGAACTGTGTCTATCGTAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACTGGAATCCTGAGCAACAGAGCTGAAGAAAATCCTGATTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCCATGGAAGCATTGAGGGCAGAGGGAATGCGATTTGCTAAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTAGAGACTTATTTCCAAGAACTACTAAAGTAAAATGTCTGAGTGATGCTGGATTATTCCTTGATGTGGCTGATATATCTGGAGGGCACTACATTAGAAACTTATTTGGAGGTGTGGTGGGCTTGCAGGGAGCGGGAAGGAATCTGCCATCCGTTTGTACGAGCCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAACGCCGCATACGATTCCTGGCAGATACAATCCAGTATAGCCCCACCTTCTCTGGATCCAGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCAAAATGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTAGCGATTTCTCAAAATCCTCTAAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGACACATGGTTCGGCGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGATCGAGCAGCGGTGAAAGCAATCGATTGTCCCTATCCTTGTGACAGGACTTGCCACCATCTGGCGAAGTCATATTGCAATTTGATTAAGAAGTCAATAAACAAGAAAGAAGAAGCTGCTGAGATGACAAATGTGATCTGCAGTCCTTCTGCAAACTTGTTTCAACATAGAAGAAAGGTTCGTATCATCATCCTCTAG 1470 44.76 MTDERGFVWWWLVLAFGIRRSETACDIWCFTRWSRAMRKPLLLLFLLSLAFTKWVHAFLPYNLSDSSLFDSYETSFAATLKPLMVPLTLIHGADAEQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALRAEGMRFAKQALLSGCSAGGLASILHCDEFRDLFPRTTKVKCLSDAGLFLDVADISGGHYIRNLFGGVVGLQGAGRNLPSVCTSHLDPTSCFFPQNLIAGIRTPLFLVNAAYDSWQIQSSIAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVSDFSKSSKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLAKSYCNLIKKSINKKEEAAEMTNVICSPSANLFQHRRKVRIIIL 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33324696 33330733 - CcPI632755_03g018620.1 Cco03g1862 175221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g1862 489 Pfam Pectinacetylesterase 81 427 IPR004963 GO:0016787(InterPro)
Cco03g1862 489 PANTHER NOTUM-RELATED 66 444 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1862 Cco-Chr3:33324696 Cco04g1008 Cco-Chr4:25698911 1.00E-123 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g1862 K19882 - csv:101218273 817.764