Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g0465 ATGCCAATAATTCTGGTTTCCCGGTCGTCGGTGTTCTTCATTCTTCTTTTGAAGGTTGTAATGGCGGCCGCCACCGTCTCATTTTGGACAGTGAAGTATCTACCTGGATTCTCAGGTCCTCTTCCATTCCAACTTGAAACTGGATACGTGGGCGTGGGAGATTGGGAGGAAGTTCAATTGTTCTATTACTTCGTTAAGTCACAAGGAAATCCCCAAAAGGATCCTCTAATGACTTGGTACACCGGAGGCCCCGGGTGCTCCGCTTTTAATGGACTCTTCGAAGAAATTGGTCCTCTAAATTTCAAGTTAGAGTTATACAATGGAACCCTACCTCAACTAATCTTGAATCCTCATACATGGGTTAAGTGGTTCGAAGCTCATCCTGAATTTATATCTAATCCCTTTTATGTTGGTGGAAGCTCATATTCTGGTATGATTGTTCCACCAATTACTCAAGCAATCTCAGAAGCCCAAAATGTTAGGATTCCTTTTGCTTATAGCATGAATCTCATCTCTACTAAATTGTATAAGTCATTGTCAAGTAATTGCAAAGGAGAATATATGAAGATTGATCCAAATAATGTGGAGTGCTTGAAGTATATAGCAACCTTCAAAAAGTGTGTGGATAGAATCAATTATTGGTGTATTTTGCTTCCTTTTTGTGTGGCTCCAATCCGAAGAATTGAACGGCGGAGATCTCTCTACAACACGTCCGAACTTGCTCCAAAAGCATTACCGGCTAATACATCTCTTGACTGTCTTGAGTATAAACACAACCTCAATTATTATTGGGCTAACGATGACCGAGTTCAAAAAGCACTACATATACGTGAGGGAACTATTAAAGAATGGGTAAGATGCAATATTACTGATGATTATGAATATGACCTTATGAGTGTTGTTCCTTATCATGCAAACCTCAGTTTAAAAGGTTATCGGTCTTTGGTTTTTAGTGGGGATCATGATATGACGGTGGCGACCATAAGCACTCAAACGTGGATTGAATCTCTAAATTATTCCATTGTTGATGATTGGAGATCTTGGTTTTCTCTAGATGACCAAATACTCGGATACACAACAACATATGCAAATAGCATGACATTTGTGACCATTAAAGGTGGAGGACACACACCGGAATACATGCCACACCAATGCGACATAATGTTTAGCAGATGGATAAAAGGAGAAGCTTTATAA 1197 39.68 MPIILVSRSSVFFILLLKVVMAAATVSFWTVKYLPGFSGPLPFQLETGYVGVGDWEEVQLFYYFVKSQGNPQKDPLMTWYTGGPGCSAFNGLFEEIGPLNFKLELYNGTLPQLILNPHTWVKWFEAHPEFISNPFYVGGSSYSGMIVPPITQAISEAQNVRIPFAYSMNLISTKLYKSLSSNCKGEYMKIDPNNVECLKYIATFKKCVDRINYWCILLPFCVAPIRRIERRRSLYNTSELAPKALPANTSLDCLEYKHNLNYYWANDDRVQKALHIREGTIKEWVRCNITDDYEYDLMSVVPYHANLSLKGYRSLVFSGDHDMTVATISTQTWIESLNYSIVDDWRSWFSLDDQILGYTTTYANSMTFVTIKGGGHTPEYMPHQCDIMFSRWIKGEAL 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14641215 14654398 - CcPI632755_04g004650.1 Cco04g0465 175690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g0465 398 SUPERFAMILY alpha/beta-Hydrolases 30 396 IPR029058 -
Cco04g0465 398 Gene3D alpha/beta hydrolase 28 121 IPR029058 -
Cco04g0465 398 Gene3D alpha/beta hydrolase 122 159 IPR029058 -
Cco04g0465 398 Gene3D alpha/beta hydrolase 160 398 IPR029058 -
Cco04g0465 398 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 121 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cco04g0465 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 366 379 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cco04g0465 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 148 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cco04g0465 398 FunFam Carboxypeptidase 251 398 - -
Cco04g0465 398 Pfam Serine carboxypeptidase 35 122 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cco04g0465 398 Pfam Serine carboxypeptidase 158 395 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g0465 Cco-Chr4:14641215 Cco05g2931 Cco-Chr5:36803452 4.80E-159 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g0465 K16296 - csv:101210918 436.032