Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g0696 ATGGACGCAAAGGGAAATGGAATTGCCAATTTTGTTGAGGGAGCACAGCCTTACATTGCTATGATCTCTCTCCAATTTGGCTATGCTGGTATGAACATCATCACCAAGGTAGCTCTCAACCGTGGAATGAGCCATTACGTTCTCGTCACCTATCGACAAGCTTTTGCCACGGTTGCCCTCGCTCCGTTCGCCTTCTTCCTTGAAAGGAAAGTGAGACCCAAGATTAGTTTCCCTATGTTGATGCAGATTTTCCTTCTGGGTTTGTTAGGGCCAGTGATTGATCAAAACTTTTATTATGCTGGACTGAAGCTCACTTCTCCTACCTTTTCATGTGCCATGAGCAATATGCTTCCTGCAATGACATTCATCTTGGCTCTTCTTTGTAGGATGGAGAAATTGGAGATGAAGAAAGTGAGATGCCAAGCAAAGGTGGTGGGAACATTGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTTTGGTCGCACCATAATTATCTTCACTCAACTACTTCTTCCAATTACTACTCTTTTGAAAGCACTTATCAAGATTGGGTAAAGGGTTCCATTCTTCTCCTTTTTGCCAATCTTGCTTGGGCTTTGTTCTTCATCCTTCAGGCAATGACATTGAGGAATTACACAGCCCATCTTTCTCTTACAACTCTTGTGTGCTTCTTTGGGACTTTGCAATCCATGGCTGTCACATTTGTAATGGAAAACAAAGCTTCTGTATGGAACATTGGATGGGACATGAATCTTCTTGCTTCTGTTTATGCTGGAATAGTTTCATCAAGCATAGCTTATTATGTCCAAGGGATGATTATGCAAAAGAGAGGGCCTGTTTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCCATAATGGGCTCCTTCATGCTTGCTGAGAAGATGTATATCGGACGTGTTGTTGGAGGTGTGGTAATGGTGGTGGGGCTGTACTCGGTGCTATGGGGGAAATACAAAGATTACAAAGAAAAGGAAGCGATAATAGAAGAAAGCACCATGGTTGAACCAGTGAAGCTTTTAATAAGTGGAGGCAAATTAGTTGAGAATAAGAAGAAAAAATTAGCAACAGTAGTTGAAGAAGAAGAAGAAGAAACGACATCAACATCATCAAACGACATTGAAATGCAAAGGAACAACACAACATCAAATGTCGACAATAATAATGTTTCAAAATTGCCTTGTCCTCCTCCACTACCCATTATTGTTGTTGTAGCTATGGATGAAGCACCACCAAAAGTTTGA 1299 41.34 MDAKGNGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATVALAPFAFFLERKVRPKISFPMLMQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFILALLCRMEKLEMKKVRCQAKVVGTLVTVGGAILMTLYKGNVISFFWSHHNYLHSTTSSNYYSFESTYQDWVKGSILLLFANLAWALFFILQAMTLRNYTAHLSLTTLVCFFGTLQSMAVTFVMENKASVWNIGWDMNLLASVYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMGSFMLAEKMYIGRVVGGVVMVVGLYSVLWGKYKDYKEKEAIIEESTMVEPVKLLISGGKLVENKKKKLATVVEEEEEETTSTSSNDIEMQRNNTTSNVDNNNVSKLPCPPPLPIIVVVAMDEAPPKV 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21559731 21563562 - CcPI632755_04g006960.1 Cco04g0696 175921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g0696 432 MobiDBLite consensus disorder prediction 380 409 - -
Cco04g0696 432 MobiDBLite consensus disorder prediction 388 409 - -
Cco04g0696 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Cco04g0696 432 PANTHER WAT1-RELATED PROTEIN 19 367 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cco04g0696 432 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
Cco04g0696 432 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g1601 Cco-Chr2:28650030 Cco04g0696 Cco-Chr4:21559731 1.10E-69 dispersed
Cco04g0696 Cco-Chr4:21559731 Cco10g1627 Cco-Chr10:29623308 1.30E-125 dispersed
Cco04g0696 Cco-Chr4:21559731 Cco11g1620 Cco-Chr11:29020257 6.00E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g0696 - - - 0.0