Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g1173 ATGGCCACTTCTGGGTTTCTTCTTTACCTTCTTCCTGCCTCTTCCATCGCCGTTCTCTCTGCTCTCTACCTCTCTAACTCTCCTTCTTCTTCCTCCTCCTCCCCCGCCCTCTCCGCCTCTCTCTCCACCGACAAAACATGGCCGGATTTGGAGCTGAGTTGGAGACTTGTGGCGGCGACGGTGATCGGATTTCTCGGCTCTGCTTGCGGGACCGTTGGAGGAGTCGGCGGCGGCGGCATTTTTGTCCCTATGCTTACTTTGATTATTGGGTTCGACACCAAATCTGCTGCTGCCATTTCCAAATGTATGATAATGGGGGCTTCTACATCATCGGTTTGGTACAATTTAAGAGTGGCTCATCCGACCAAGGATGTGCCGATTATAGATCATGATTTAGCTTTGTTGTTTCAGCCTATGTTGATGCTTGGAATCACCGTTGGTGTTGCCCTTAGCGTTGTTTTTCCCTACTGGCTTATCACTGTGCTCATCATTATTCTCTTTATTGGGACTTCCTCCAGGTCTTTCTTCAAGGGCATTGAGATGTGGAAAGAAGAAACTATTCTCAAGAAAGAATTTGCCAAACAATGTGAAACTGTTGTGAATTCTCGTGGCGAACTATTGATTGATGTAGAGTATGACCCACTGATTCCCAAAGAACAGAAAACAGCACTGGAATTAATGTGCTTCAATCTTAGGTGGAAAAGGACCTCCATTTTGCTAGTTGTTTGGATTTCTTTCCTCATACTTCAAGTTGTGAAGAATGATGTAGCAGTTTGTAGCAATTGGTATTGGCTCATCTTCTCCTTACAGTTCCCCATAGCAATTGGAGTGTTTGGTTATGAAGCAAGAAAGCTATACAAAGAACACAAGAAGAGGATGGAGACAGGGAACTTAGAACACATTTGTGAGGCTTCAATAGGATGGACTGGCACACACCTTGCCTTTTGTGCACTCTGTGGCATTGTTGGAGGCACTGTTGGAGGCCTTTTGGGTTCTGGTGGTGGCTTTGTTTTAGGCCCTTTGCTCTTGGAAATTGGTGTTGTCCCTCAAGTTGCTAGTGCCACAGCAACTTTTGTTATGATGTTCTCCTCTTCCTTATCTGTTGTTGAGTTCTACTTGCTCAACAGGTTTCCCATTCCATATGCTCTGTACCTTACATCGGTGTCGGTTCTCGCTGGGTTCTGGGGGCAGTTCTTTGTTAGAAAAATGATCACCATTCTAAGGAGAGCCTCACTCATTGTGTTTATCCTATCTGGTGTCATCTTTGCTAGTGCCATCACCATGGGCATTGTAGGAATAACGAAAAGTATAACAATGATACAGAATCATGAGTTCATGGGGTTCTTAGATTTCTGCAGCAGTGGAAGAATTGGCCAACGCCTTGTTGTCCAATCCAATCCCATGTTGTTTGTGAAGAAAAATAATAAGGTGATTGATGACTGTTAG 1446 44.74 MATSGFLLYLLPASSIAVLSALYLSNSPSSSSSSPALSASLSTDKTWPDLELSWRLVAATVIGFLGSACGTVGGVGGGGIFVPMLTLIIGFDTKSAAAISKCMIMGASTSSVWYNLRVAHPTKDVPIIDHDLALLFQPMLMLGITVGVALSVVFPYWLITVLIIILFIGTSSRSFFKGIEMWKEETILKKEFAKQCETVVNSRGELLIDVEYDPLIPKEQKTALELMCFNLRWKRTSILLVVWISFLILQVVKNDVAVCSNWYWLIFSLQFPIAIGVFGYEARKLYKEHKKRMETGNLEHICEASIGWTGTHLAFCALCGIVGGTVGGLLGSGGGFVLGPLLLEIGVVPQVASATATFVMMFSSSLSVVEFYLLNRFPIPYALYLTSVSVLAGFWGQFFVRKMITILRRASLIVFILSGVIFASAITMGIVGITKSITMIQNHEFMGFLDFCSSGRIGQRLVVQSNPMLFVKKNNKVIDDC 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27155724 27159541 + CcPI632755_04g011730.1 Cco04g1173 176398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g1173 481 Pfam Sulfite exporter TauE/SafE 315 420 IPR002781 GO:0016020(InterPro)
Cco04g1173 481 Pfam Sulfite exporter TauE/SafE 61 179 IPR002781 GO:0016020(InterPro)
Cco04g1173 481 PANTHER CEREBLON 39 452 - GO:0016567(PANTHER)|GO:0031464(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1173 Cco-Chr4:27155724 Cco11g1454 Cco-Chr11:27342128 2.00E-103 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g1173 - - - 0.0