Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco04g1202 | ATGGGAGACTTGCCCGGCGGATCTCCGTCGTCCACGGTGGCGGATGACCACCACAACCTGCTTTTGGACGCCATTGGAGATGAAAAGATAGCAAGAGAGTCCAAAATCTACAGCTATGGAAAGAGCTTCAATGGGTTCGCCGCAAGACTTTTGCCTCACGAAGCCACCAAGCTCTCAAATGAGGAGGGTGTAGTTTCGGTATTTCGTAGCAGAAAGCAAAGAATTGTGACGACAAGATCCTGGAATTTTTTGGGATTAGATCATCATTATTCCAAACGTAACCCTAAAATTGAGTCTAATCTCATTGTCGCGGTTTTGGATACGGGGATTTGGATTGACAGTCCTAGTTTCAACGATGAAGGCTATGGCCCACCACCCTCTAAATGGAAGGGCAAGTGCGTCACTGGGCCCAACTTCACAGCCTGCAACAACAAAGTAATCGGTGCGACTTACTTCGATCTGGAAAACGTAAGCCAATATCCAGAGTCGAGCGTGGCGGACACGGAGGGCCACGGCTCTCACACGGCGTCCACGGTGGCAGGTTCGGCCGTGGAGGGGGCGAGCTTGTACGGCCTGGCCAAAGGGACGGCGCGCGGCGGCGTGCCTTCAGCTCGAATTGCAGTCTACAAAGTGTGTTGGAGCATTTTCTGCAGCGAAATGGACGTTCTTGCTGGCTTCGATGAGGCAATCGCCGATGGCGTCGATTTGATTTCCGTCTCCATAGGGTCCCGGCCGATGGATTTCTTCAGGGACGGCCAAGCAATTGGGGCTTTTCATGCCATGAAGAAGGGAATTTTGACGTCCTGCGCCGCCGGCAACGACGGCCCTGAATTGTCCACCGTCGAGAATGTGGCGCCCTGGATTATGACCGTCGCTGCTACGGCCATTGATAGACGGTTCGTCACCGCTTTCAAACTCGGTAATGGCAACAAATTTACTGGACGTTCCATCAACACCTTCTCGCCAGAGAAAGAAATGTACTCTCTTACAAGCGGAGCCAAAGCGTCCAACAATGGCACACCCTATCAAGGAAATGCAAGTGCTTGTGATCCAGAAGCTATAAGCCAAAGCAAAGTGAAGGGAAAGATTGTATATTGCTTGAAAACTTACACAGACCCCTACATCAAATCCTTAGGAGGCACTGGAGTCATTCAACTCACTCGACAACAAGCTGATTATTCCTCCATTTTGCTTCTTCCTGGGGTTACCATCCCCTCACTCTCTGGCAAATACATTGATCTTTATATCAACTCCACCAAGAATCCTAAAGCTGTCATTTATAAGAGTAAAACTGTCAGAATTGATGCTCCCTTTGTTGCTTCTTTCTCATCTAGAGGGCCTCAGTTTATCAGTAGTAACATTCTCAAGCCTGATCTTTCTGCACCAGGGATAGACATCTTGGCTGCTTATACAAAACTAGCAAGTTTGACAGGGGATATGTCAGACAGTAGATATAGTTTATTCACTGTAATGTCAGGTACATCCATGGCCTGTCCTCATGCCACAGCAGCGGCTGCATATGTTAAGTCATTCCACCCCGACTGGTCTCCAGCTGCGGTCAAGTCTGCTCTCATGACCACTGCAACTCCAATGAAGATCAAATCCAAGGACGCTGTACTTGGCTCTGGAGCAGGACAAATAAATCCAACCAAGGCAGTGCATCCCGGCCTTATTTACAACATTTCGTTCAACTCCTACATCTCTTTCCTCTGCAAAGAAGGCTACAACAGCACAACAATCGGCCTACTTGATGGTAACAAGAAGCATAACTGCTCCAAGATCAAGCCTGCACAAGGAACCGATGGTCTCAACTACCCTACAATGCACAAACAGCTCTCAGATCCTAGTTCAGCCATCAAGGCGGTCTTTTATCGAACAGTGACTCATGTCGGGTATGGTCCATCGTTGTACAGGGCAAATATATCATCTCCAGATGGCCTATCTGTCAAAGTTTTTCCAGACACCCTAAATTTTGTTAAGTTACATGAAACGAAAACATTTAAAGTTGTGGTGAAGGGAAAACCTATGCCAGAAGGAATATGGATTCGATCAGCTTTACTTGAATGGAACGACTCTAAACACATAGTTAGAAGCAATATCCTTATCTACAGGAAATTGATCTAA | 2124 | 47.55 | MGDLPGGSPSSTVADDHHNLLLDAIGDEKIARESKIYSYGKSFNGFAARLLPHEATKLSNEEGVVSVFRSRKQRIVTTRSWNFLGLDHHYSKRNPKIESNLIVAVLDTGIWIDSPSFNDEGYGPPPSKWKGKCVTGPNFTACNNKVIGATYFDLENVSQYPESSVADTEGHGSHTASTVAGSAVEGASLYGLAKGTARGGVPSARIAVYKVCWSIFCSEMDVLAGFDEAIADGVDLISVSIGSRPMDFFRDGQAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATAIDRRFVTAFKLGNGNKFTGRSINTFSPEKEMYSLTSGAKASNNGTPYQGNASACDPEAISQSKVKGKIVYCLKTYTDPYIKSLGGTGVIQLTRQQADYSSILLLPGVTIPSLSGKYIDLYINSTKNPKAVIYKSKTVRIDAPFVASFSSRGPQFISSNILKPDLSAPGIDILAAYTKLASLTGDMSDSRYSLFTVMSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSKDAVLGSGAGQINPTKAVHPGLIYNISFNSYISFLCKEGYNSTTIGLLDGNKKHNCSKIKPAQGTDGLNYPTMHKQLSDPSSAIKAVFYRTVTHVGYGPSLYRANISSPDGLSVKVFPDTLNFVKLHETKTFKVVVKGKPMPEGIWIRSALLEWNDSKHIVRSNILIYRKLI | 707 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 27448513 | 27452755 | - | CcPI632755_04g012020.1 | Cco04g1202 | 176427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco04g1202 | 707 | Gene3D | - | 297 | 432 | - | - | |
Cco04g1202 | 707 | Pfam | Peptidase inhibitor I9 | 10 | 72 | IPR010259 | - | |
Cco04g1202 | 707 | Pfam | Fibronectin type-III domain | 603 | 702 | IPR041469 | - | |
Cco04g1202 | 707 | PRINTS | Subtilisin serine protease family (S8) signature | 167 | 180 | IPR015500 | - | |
Cco04g1202 | 707 | PRINTS | Subtilisin serine protease family (S8) signature | 98 | 117 | IPR015500 | - | |
Cco04g1202 | 707 | PRINTS | Subtilisin serine protease family (S8) signature | 492 | 508 | IPR015500 | - | |
Cco04g1202 | 707 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 80 | 553 | - | - | |
Cco04g1202 | 707 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 103 | 113 | IPR023827 | - | |
Cco04g1202 | 707 | Pfam | Subtilase family | 99 | 542 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco04g1202 | 707 | CDD | PA_subtilisin_like | 304 | 426 | - | - | |
Cco04g1202 | 707 | CDD | Peptidases_S8_3 | 77 | 529 | IPR034197 | - | |
Cco04g1202 | 707 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 493 | 503 | IPR023828 | - | |
Cco04g1202 | 707 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 32 | 699 | IPR045051 | - | |
Cco04g1202 | 707 | SUPERFAMILY | Subtilisin-like | 14 | 580 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco04g1202 | 707 | Gene3D | Peptidase S8/S53 domain | 101 | 566 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco04g1202 | 707 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 75 | IPR037045 | - | |
Cco04g1202 | 707 | Gene3D | - | 570 | 705 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g1202 | Cco-Chr4:27448513 | Cco07g0711 | Cco-Chr7:13051037 | 2.50E-190 | dispersed | |
Cco01g0101 | Cco-Chr1:834855 | Cco04g1202 | Cco-Chr4:27448513 | 1.50E-160 | transposed | |
Cco05g2449 | Cco-Chr5:32942669 | Cco04g1202 | Cco-Chr4:27448513 | 2.70E-163 | transposed | |
Cco09g1717 | Cco-Chr9:28749488 | Cco04g1202 | Cco-Chr4:27448513 | 2.40E-16 | transposed | |
Cco10g1903 | Cco-Chr10:32583886 | Cco04g1202 | Cco-Chr4:27448513 | 3.80E-199 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco04g1202 | - | - | - | 0.0 |