Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g1291 ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCCGGCGCTGGGTCAGCTGACCTGAACTCCAAACTCACCGCCGTTCCTTCTGTTGCGTCTCCTGGGGTTGTGGGATACAAGTTGCCTGCGATCAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCACCCTCTTTGCTGCTGCTGCGGCTGCGGCTGCCTCCAACTCCTCTGCCAATGCTGGAGTCATTGAAGATTACCTTGAGAAGAGTAAAGCTAACAAGGAGTTGAATGACAAGAAAAGATTGGCAACAAGTGGGGCAAACTTTGCAAGGGCATACACTGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGTAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA 522 49.23 MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28198069 28199271 + CcPI632755_04g012910.1 Cco04g1291 176516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g1291 173 FunFam Photosystem I reaction center subunit N 89 173 - -
Cco04g1291 173 Gene3D - 89 173 IPR044907 -
Cco04g1291 173 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 173 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER)
Cco04g1291 173 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 43 173 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g1291 K02701 - csv:101204396 302.753