Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g1449 ATGGACCATTCCATTCCCAACAACTGCGATGGAAATGCATGTACTTCGTCGACGTGGACTCTCCCCACCGCCGCCGCCTCCTCCTCTTCCCCTCCCGACGATATCTCTCTGTTTCTGCAACAGATTTTGCTACGTTCCTCTTCCTCTGCTCCCCATTCCTCTCTCCTCTCTCCCTCTCCCTCCATCTTCTCCGAGCTCACCTGCAACATTAGAGCCTTCACCCCATCAACCCATAACATTCCCCCTCCATACGGGCCGTCTAATGCAGTGCCCGACGAGATCTCCGCCGTCGATTCCTCAGAACAATTTGCAAATTCCTCATCGTCCGGTGTACTACATGATCCCTTGCGCTCTTGTCCCACACCCATTCCACCCAATGCGTCTTCTACGTCTGTTGGAGCTAGTGATCACAACGAAAACGATGAATTTGACTGCGAAAGTGAGGAGGGTCTGGAGGCATTGGTTGAAGAGCAGCCTACAAAGCCAAATCCTCGCAGCTCTTCCAAAAGAAGCAGAGCCGCCGAAGTTCATAATTTGTCTGAAAAGAGAAGGAGGAGCAGAATTAATGAGAAAATGAAGGCACTGCAAAATCTGATCCCTAATTCTAACAAGACTGACAAGGCCTCGATGCTGGACGAAGCAATTGAATATCTGAAGCAGCTTCAACTTCAAGTTCAGATGCTGTCGATGAGAAATGGCTTGAGTTTGCATCCTATGAACTTGCCTGGAAGTCTGCAATATCTCCAACTTTCCCACATGAGAATGGACTTCGGTGAAGAAAACAGGTCAATGTCCTCTGACCAAGAAAGACCAAACCAGATCTTTCTCAGTTTGCCTGACCAAAAGACTGCCTCCATCCATCCTTTCATGTCAGACATTGGAAGAACTAATGCAGAAACTCCATTTGAATTGACCCCGCCCATCCAGGCTCAACTAGTCCCTTTTTACTTGAGTGAGTCCTCCAAGTCTAAGGAGATTTGCAGCAGAGATGTACTGCGAGGTGATCACCAGGTGAATATGTATGTGAGCCAATCGGAGACAACTCCCTTCATGTCACACCCCTATAATATATCGGCGCCTCCTGATTTACAAGGATTAAGGAATTGCGTCTCAGTGGAACCAAGCATCATAGAAGGAAATCGGTCAGGTGTGCTTCTAAATTACACTCCAGAGCACAGCCTTGTATTCCCTTCCCCTCTTAGTGGGGAAATTGGATTGGATGGGGTTTCTGAAGTGTTGATGACATCTAAGACATCAATCTTCGTGGCGTGGAGCTTGAGGCTGAGAATGATGAATTTTAATGAGTGCCATTTCTCACATGGCGGGGCAGAGTTTGTAAAGAAGACCTCTGTACCCGCCTCTGATGTGACCACCGACTATAAATTTATCCTTTCAATTCTTTTTGGCTCCATGGCCGATCAGCTCTCTAAGCAGACCTCTATTTTTGGCCTACGCTTGTGGGTTGTTCTTGGGGTTTGTGTTGGAGCCGCTTTTGTGCTCTTTCTGTTTCTAATTTCTCTTTGGATTGCTTCTAAACGCTCCCGCAAGAAGATTTCTCACAGACCCACTATCCCAATCGTCTCCAAAGAAATCCAAGAGATCAGAGTCGATCATGCCCTCGCTCAAAACCAAGAACATAAGCCGAGTAGGTCCCATTTTCAGGTCGACCCACTTCCGGAGCCGGAACCAATCCCTGGAATTGAGCGGCAGGCTTTGCTTTCGTTGCCTCAGGAGGAAGAGCGAGTGAATAGGATTCATATTGAGATCGGGAAAGATCATAGGATTTCATATCCTGAGCGCCTTGGTCGGTCGTCTTCCTCACAGGGGAGTGGAGAGGGCCGATGTGGTGGCGATCAGTTGCCTATGGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGACACTGGTACACTCTCAGAGAGCTTGAAGCTTCGACTAATGGTTTCGCCCCCGACAATGTAATTGGCGAGGGTGGGTATGGAATTGTTTACCATGGCATATTGGAAGATGGAACTCAGGTTGCTGTGAAGAATTTGCTAAACAATAGGGGACAAGCCGAGAAGGAGTTTAAAGTTGAAGTTGAAGCAATTGGACGAGTTAGACATAAGAACTTAGTTAGACTGCTTGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATATGAGTATATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGATGTGGGATCTTTCAGCCCTCTTACCTGGGAGATTAGAATGAATATCATTCTTGGAACCGCAAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCAAAGGTTGTTCACCGGGATATCAAATCAAGCAATATCTTACTCGATAAGCAATGGAATCCCAAGGTTTCAGATTTTGGGCTTGCAAAGCTACTGTGCTCTGATAATAGTTATATTACAACCCGAGTAATGGGGACATTTGGCTATGTAGCACCAGAATATGCAAGTACAGGAATGCTAAATGAAAGAAGTGATGTGTATAGTTTTGGAATACTTGTTATGGAAATAATCTCAGGACGTAATCCCGTCGAGTATAGTCGTCCTCCCGATGAGGTGAACTTGATCGATTGGCTCAAGAGAATGGTCACTAACCAAAATCCAGAGGGCGTATTGGATCCAAAGCTTTCTGAAAAGCCTACTTCAAGAGCATTAAAGCGGGCTCTACTTGTTGCATTACGCTGCGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTTGAAGCCGAAGATGCTAACTTTAAAGGGGATCGTAAAGCTGGAAAGGACCCAGAGAATTCACATTCAAACAATGTCAAAGATGGTTTAAATGAAAGGCAGGCAACAGAATTAGGTGGCAGCAGTGTCGATGGACTCGTCCTTATACCATTGATACCTTATACCATTGAAGATAAAATCAATTCATGTCTCCGTCGATGCCCCTCCCAAGACGGTCTTTTCAGAGGAGGAGGTAACCAACAAACTGGTTATCAGTATGATCGGAGGGAAGGGAGACAATCGGAATAA 3042 46.19 MDHSIPNNCDGNACTSSTWTLPTAAASSSSPPDDISLFLQQILLRSSSSAPHSSLLSPSPSIFSELTCNIRAFTPSTHNIPPPYGPSNAVPDEISAVDSSEQFANSSSSGVLHDPLRSCPTPIPPNASSTSVGASDHNENDEFDCESEEGLEALVEEQPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMNLPGSLQYLQLSHMRMDFGEENRSMSSDQERPNQIFLSLPDQKTASIHPFMSDIGRTNAETPFELTPPIQAQLVPFYLSESSKSKEICSRDVLRGDHQVNMYVSQSETTPFMSHPYNISAPPDLQGLRNCVSVEPSIIEGNRSGVLLNYTPEHSLVFPSPLSGEIGLDGVSEVLMTSKTSIFVAWSLRLRMMNFNECHFSHGGAEFVKKTSVPASDVTTDYKFILSILFGSMADQLSKQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRKKISHRPTIPIVSKEIQEIRVDHALAQNQEHKPSRSHFQVDPLPEPEPIPGIERQALLSLPQEEERVNRIHIEIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPMVVPEVSHLGWGHWYTLRELEASTNGFAPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGDVGSFSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILVMEIISGRNPVEYSRPPDEVNLIDWLKRMVTNQNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEDANFKGDRKAGKDPENSHSNNVKDGLNERQATELGGSSVDGLVLIPLIPYTIEDKINSCLRRCPSQDGLFRGGGNQQTGYQYDRREGRQSE 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29903922 29912437 - CcPI632755_04g014490.1 Cco04g1449 176674

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g1449 1013 Pfam Protein kinase domain 652 917 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cco04g1449 1013 SUPERFAMILY Protein kinase-like (PK-like) 629 920 IPR011009 -
Cco04g1449 1013 FunFam Basic helix-loop-helix transcription factor 167 230 - -
Cco04g1449 1013 MobiDBLite consensus disorder prediction 989 1013 - -
Cco04g1449 1013 Coils Coil 211 231 - -
Cco04g1449 1013 SMART finulus 178 227 IPR011598 GO:0046983(InterPro)
Cco04g1449 1013 MobiDBLite consensus disorder prediction 168 184 - -
Cco04g1449 1013 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 232 IPR036638 GO:0046983(InterPro)
Cco04g1449 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cco04g1449 1013 MobiDBLite consensus disorder prediction 928 949 - -
Cco04g1449 1013 Pfam Helix-loop-helix DNA-binding domain 175 222 IPR011598 GO:0046983(InterPro)
Cco04g1449 1013 FunFam Probable serine/threonine-protein kinase At1g01540 628 723 - -
Cco04g1449 1013 MobiDBLite consensus disorder prediction 98 114 - -
Cco04g1449 1013 Gene3D Transferase(Phosphotransferase) domain 1 724 934 - -
Cco04g1449 1013 SMART serkin_6 648 919 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cco04g1449 1013 FunFam Putative receptor-like serine/threonine-protein kinase 724 934 - -
Cco04g1449 1013 MobiDBLite consensus disorder prediction 98 184 - -
Cco04g1449 1013 ProSitePatterns Protein kinases ATP-binding region signature. 654 676 IPR017441 GO:0005524(InterPro)
Cco04g1449 1013 Gene3D - 167 231 IPR036638 GO:0046983(InterPro)
Cco04g1449 1013 CDD STKc_IRAK 654 920 - -
Cco04g1449 1013 CDD bHLH_AtPIF_like 172 234 IPR047265 -
Cco04g1449 1013 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983(InterPro)
Cco04g1449 1013 Gene3D Phosphorylase Kinase; domain 1 629 723 - -
Cco04g1449 1013 ProSiteProfiles Protein kinase domain profile. 648 926 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cco04g1449 1013 PANTHER OS01G0323000 PROTEIN 471 946 IPR052232 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g1449 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1449 Cco-Chr4:29903922 Cco05g0170 Cco-Chr5:1351734 4.20E-167 dispersed
Cco08g1792 Cco-Chr8:29054026 Cco04g1449 Cco-Chr4:29903922 8.00E-39 dispersed
Cco10g1016 Cco-Chr10:21824618 Cco04g1449 Cco-Chr4:29903922 5.80E-10 dispersed
Cco10g1712 Cco-Chr10:30666634 Cco04g1449 Cco-Chr4:29903922 2.50E-08 dispersed
Cco11g1711 Cco-Chr11:29928241 Cco04g1449 Cco-Chr4:29903922 3.10E-23 dispersed
Cco08g1791 Cco-Chr8:29047106 Cco04g1449 Cco-Chr4:29903922 1.00E-201 transposed
Cco11g1560 Cco-Chr11:28491452 Cco04g1449 Cco-Chr4:29903922 4.10E-23 transposed
Cco04g1449 Cco-Chr4:29903922 Cco05g2262 Cco-Chr5:31350406 5.70E-08 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cco08g1216 . 1 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 54.4 4.5e-80 295.0
Cco05g0504 . 310 487 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 59.6 1.3e-41 167.2
Cco10g0542 . 1 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 67.4 6.9e-65 244.2
Cco05g1689 . 1 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 66.7 1.4e-57 219.9
Cco02g0899 . 4 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 57.5 1.8e-44 176.4
Cco10g1351 . 7 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 58.0 5.5e-60 228.0
Cco10g0563 . 226 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 52.5 4.1e-46 182.6
Cco05g1458 . 41 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 56.3 4.2e-117 418.7
Cco03g0399 . 51 519 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 50.3 6.4e-102 368.2
Cco04g1798 . 111 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 59.9 5.5e-49 191.8
Cco02g1250 . 49 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 50.8 1.0e-47 187.6
Cco10g0563 . 121 433 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 52.2 1.3e-60 230.7
Cco07g1749 . 105 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 57.3 2.2e-58 223.0
Cco05g0096 . 14 610 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 51.8 6.9e-154 541.2
Cco03g0397 . 159 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 65.9 1.4e-40 163.7
Cco06g0447 . 38 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 59.4 2.5e-43 172.6
Cco05g0783 . 41 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 55.4 1.4e-38 156.8
Cco06g0447 . 36 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.1 3.0e-46 182.2
Cco05g0783 . 39 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 52.9 4.7e-39 158.3
Cco07g1603 . 23 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.8 2.8e-41 165.2
Cco07g1603 . 21 155 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 65.2 8.6e-40 160.2
Cco04g1449 . 127 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 77.3 5.9e-42 168.7
Cco02g0802 . 163 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 60.3 1.1e-47 187.6
Cco02g2312 . 9 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.3 3.1e-60 229.2
Cco05g2572 . 61 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 57.8 3.6e-76 282.3
Cco06g1118 . 66 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 56.9 1.5e-66 250.4
Cco10g1351 . 62 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 52.2 1.9e-40 163.7
Cco08g1056 . 1 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 51.2 1.2e-52 204.1
Cco06g1859 . 96 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.9 6.2e-46 181.8
Cco05g0504 . 310 487 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 57.1 1.2e-37 154.1
Cco06g1562 . 2 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 56.0 2.2e-52 202.6
Cco05g2262 . 16 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 59.0 2.4e-46 182.6
Cco02g1369 . 47 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 72.3 1.3e-42 170.2
Cco08g1786 . 102 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 73.1 1.9e-38 156.4
Cco04g1305 . 74 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.2e-36 150.2
Cco04g1305 . 79 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 1.0e-41 167.2
Cco01g1702 . 110 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 68.9 4.1e-44 175.3
Cco06g1671 . 97 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 70.9 3.5e-43 172.2
Cco05g0638 . 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 67.0 9.2e-58 220.3
Cco05g2919 . 207 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 52.8 2.8e-44 176.8
Cco09g1216 . 69 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.5 1.3e-149 526.9
Cco10g0168 . 66 646 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.3 1.2e-145 513.8
Cco01g1702 . 102 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 67.5 1.2e-46 183.7
Cco08g0631 . 75 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 61.9 9.5e-39 157.5
Cco05g2315 . 245 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.9 1.4e-37 153.7
Cco02g0529 . 332 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 77.6 8.4e-39 157.9
Cco09g0721 . 74 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.2 2.3e-95 345.5
Cco03g1698 . 133 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 74.6 3.6e-64 241.9
Cco06g1413 . 159 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.6 4.9e-45 178.3
Cco02g1832 . 222 412 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 59.2 1.1e-44 177.2
Cco09g1216 . 1 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.1 4.0e-176 615.1
Cco10g0168 . 1 646 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.4 9.8e-167 583.9
Cco10g1708 . 1 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 54.1 1.8e-78 290.0
Cco11g1535 . 153 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 63.9 1.7e-58 223.4
Cco04g1576 . 140 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 58.5 1.9e-57 219.9
Cco08g1344 . 163 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.0 8.7e-55 211.1
Cco02g0529 . 338 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 85.3 1.4e-39 161.0
Cco01g0767 . 335 431 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 82.5 1.2e-38 157.9
Cco05g2606 . 330 426 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 81.4 3.5e-38 156.4
Cco02g0529 . 325 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.9 1.1e-42 171.0
Cco05g0854 . 338 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 68.3 2.7e-38 156.4
Cco11g0449 . 138 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 73.6 2.7e-38 156.4
Cco05g2606 . 331 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 50.6 3.9e-37 152.5
Cco01g0767 . 336 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 5.1e-37 152.1
Cco02g0529 . 319 427 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.1 2.7e-39 159.8
Cco06g1413 . 206 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 66.0 8.6e-66 247.3
Cco02g1832 . 233 449 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 4.0e-63 238.4
Cco03g1698 . 145 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.0 1.3e-45 180.3
Cco09g0721 . 139 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 58.2 1.6e-43 173.3
Cco06g1413 . 208 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 61.2 2.8e-57 219.5
Cco02g1832 . 243 450 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.9 1.8e-56 216.9
Cco09g0721 . 150 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 6.7e-43 171.8
Cco03g1698 . 152 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.7 1.9e-42 170.2
Cco09g0721 . 1 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 61.9 4.7e-91 331.6
Cco03g1698 . 133 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 65.0 3.6e-59 225.7
Cco06g1413 . 204 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 57.5 8.1e-43 171.4
Cco02g1832 . 217 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 50.7 2.9e-40 162.9
Cco05g2606 . 320 505 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 55.9 6.2e-44 175.3
Cco01g0767 . 326 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 78.5 2.2e-41 166.8
Cco08g1853 . 191 347 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 54.8 4.3e-37 152.5
Cco06g1671 . 132 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 65.5 3.4e-37 152.1
Cco05g0854 . 334 478 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 62.3 4.9e-39 159.1
Cco05g2919 . 218 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 51.1 2.7e-37 153.3
Cco01g0767 . 326 510 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 53.8 4.2e-40 162.5
Cco05g2606 . 314 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.3 1.6e-39 160.6
Cco02g0529 . 325 460 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 64.5 3.9e-38 156.0
Cco02g0529 . 327 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 75.7 6.4e-38 155.6
Cco01g0767 . 322 483 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 53.9 1.1e-37 154.8
Cco05g2606 . 325 424 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 78.2 1.1e-37 154.8
Cco06g1859 . 78 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 56.4 1.1e-69 260.4
Cco08g0076 . 22 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 54.7 3.1e-49 192.2
Cco08g0076 . 22 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 60.3 8.6e-64 240.7
Cco06g1413 . 172 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 65.4 7.2e-59 224.6
Cco02g1832 . 236 405 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 69.5 2.4e-54 209.5
Cco03g1698 . 141 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 60.2 3.8e-44 175.6
Cco09g0721 . 132 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.5 2.5e-43 172.9
Cco03g0877 . 137 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 67.5 1.2e-42 170.6
Cco10g1016 . 214 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 63.9 1.9e-39 160.2
Cco02g0747 . 195 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 71.9 5.6e-39 158.7
Cco10g1016 . 266 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 4.4e-39 159.1
Cco02g0747 . 222 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.1 1.7e-38 157.1
Cco05g2315 . 247 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.0 2.8e-38 156.4
Cco08g1827 . 235 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 87.2 5.4e-37 152.1
Cco03g0877 . 102 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 57.2 2.0e-43 173.3
Cco09g0037 . 114 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 51.7 1.1e-64 244.2
Cco05g2262 . 21 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 61.2 8.6e-44 174.1
Cco02g1369 . 71 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.4 8.9e-41 164.1
Cco08g1786 . 118 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 85.9 7.1e-38 154.5
Cco09g1188 . 83 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 54.8 4.6e-43 172.2
Cco08g1287 . 2 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.3 1.5e-51 200.3
Cco02g1721 . 107 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 2.1e-45 179.9
Cco09g1188 . 84 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 50.5 5.0e-39 158.7
Cco05g0386 . 122 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.7 2.3e-92 336.3
Cco09g1216 . 69 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.5 1.3e-149 526.9
Cco10g0168 . 66 646 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.3 1.2e-145 513.8
Cco09g1216 . 1 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.1 4.0e-176 615.1
Cco10g0168 . 1 646 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.4 9.8e-167 583.9
Cco09g0721 . 1 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 61.9 4.7e-91 331.6
Cco03g1698 . 133 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 65.0 3.6e-59 225.7
Cco06g1413 . 204 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 57.5 8.1e-43 171.4
Cco02g1832 . 217 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 50.7 2.9e-40 162.9
Cco05g0096 . 14 610 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 51.8 6.9e-154 541.2
Cco04g1449 . 127 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 77.3 5.9e-42 168.7
Cco02g0802 . 163 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 60.3 1.1e-47 187.6
Cco02g2312 . 9 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.3 3.1e-60 229.2
Cco05g2572 . 61 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 57.8 3.6e-76 282.3
Cco06g1118 . 66 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 56.9 1.5e-66 250.4
Cco10g1351 . 62 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 52.2 1.9e-40 163.7
Cco08g1056 . 1 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 51.2 1.2e-52 204.1
Cco06g1859 . 96 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.9 6.2e-46 181.8
Cco05g0504 . 310 487 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 57.1 1.2e-37 154.1
Cco06g1562 . 2 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 56.0 2.2e-52 202.6
Cco05g2262 . 16 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 59.0 2.4e-46 182.6
Cco02g1369 . 47 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 72.3 1.3e-42 170.2
Cco08g1786 . 102 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 73.1 1.9e-38 156.4
Cco04g1305 . 74 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.2e-36 150.2
Cco04g1305 . 79 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 1.0e-41 167.2
Cco01g1702 . 110 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 68.9 4.1e-44 175.3
Cco06g1671 . 97 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 70.9 3.5e-43 172.2
Cco05g0638 . 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 67.0 9.2e-58 220.3
Cco05g2919 . 207 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 52.8 2.8e-44 176.8
Cco01g1702 . 102 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 67.5 1.2e-46 183.7
Cco08g0631 . 75 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 61.9 9.5e-39 157.5
Cco05g2315 . 245 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.9 1.4e-37 153.7
Cco02g0529 . 332 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 77.6 8.4e-39 157.9
Cco09g0721 . 74 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.2 2.3e-95 345.5
Cco03g1698 . 133 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 74.6 3.6e-64 241.9
Cco06g1413 . 159 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.6 4.9e-45 178.3
Cco02g1832 . 222 412 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 59.2 1.1e-44 177.2
Cco10g1708 . 1 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 54.1 1.8e-78 290.0
Cco11g1535 . 153 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 63.9 1.7e-58 223.4
Cco04g1576 . 140 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 58.5 1.9e-57 219.9
Cco08g1344 . 163 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.0 8.7e-55 211.1
Cco02g0529 . 338 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 85.3 1.4e-39 161.0
Cco01g0767 . 335 431 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 82.5 1.2e-38 157.9
Cco05g2606 . 330 426 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 81.4 3.5e-38 156.4
Cco02g0529 . 325 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.9 1.1e-42 171.0
Cco05g0854 . 338 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 68.3 2.7e-38 156.4
Cco11g0449 . 138 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 73.6 2.7e-38 156.4
Cco05g2606 . 331 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 50.6 3.9e-37 152.5
Cco01g0767 . 336 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 5.1e-37 152.1
Cco02g0529 . 319 427 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.1 2.7e-39 159.8
Cco06g1413 . 206 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 66.0 8.6e-66 247.3
Cco02g1832 . 233 449 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 4.0e-63 238.4
Cco03g1698 . 145 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.0 1.3e-45 180.3
Cco09g0721 . 139 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 58.2 1.6e-43 173.3
Cco06g1413 . 208 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 61.2 2.8e-57 219.5
Cco02g1832 . 243 450 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.9 1.8e-56 216.9
Cco09g0721 . 150 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 6.7e-43 171.8
Cco03g1698 . 152 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.7 1.9e-42 170.2
Cco05g2606 . 320 505 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 55.9 6.2e-44 175.3
Cco01g0767 . 326 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 78.5 2.2e-41 166.8
Cco08g1853 . 191 347 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 54.8 4.3e-37 152.5
Cco06g1671 . 132 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 65.5 3.4e-37 152.1
Cco05g0854 . 334 478 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 62.3 4.9e-39 159.1
Cco05g2919 . 218 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 51.1 2.7e-37 153.3
Cco01g0767 . 326 510 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 53.8 4.2e-40 162.5
Cco05g2606 . 314 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.3 1.6e-39 160.6
Cco02g0529 . 325 460 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 64.5 3.9e-38 156.0
Cco02g0529 . 327 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 75.7 6.4e-38 155.6
Cco01g0767 . 322 483 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 53.9 1.1e-37 154.8
Cco05g2606 . 325 424 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 78.2 1.1e-37 154.8
Cco06g1859 . 78 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 56.4 1.1e-69 260.4
Cco08g0076 . 22 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 54.7 3.1e-49 192.2
Cco08g0076 . 22 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 60.3 8.6e-64 240.7
Cco06g1413 . 172 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 65.4 7.2e-59 224.6
Cco02g1832 . 236 405 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 69.5 2.4e-54 209.5
Cco03g1698 . 141 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 60.2 3.8e-44 175.6
Cco09g0721 . 132 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.5 2.5e-43 172.9
Cco03g0877 . 137 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 67.5 1.2e-42 170.6
Cco10g1016 . 214 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 63.9 1.9e-39 160.2
Cco02g0747 . 195 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 71.9 5.6e-39 158.7
Cco10g1016 . 266 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 4.4e-39 159.1
Cco02g0747 . 222 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.1 1.7e-38 157.1
Cco05g2315 . 247 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.0 2.8e-38 156.4
Cco08g1827 . 235 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 87.2 5.4e-37 152.1
Cco03g0877 . 102 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 57.2 2.0e-43 173.3
Cco09g0037 . 114 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 51.7 1.1e-64 244.2
Cco05g2262 . 21 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 61.2 8.6e-44 174.1
Cco02g1369 . 71 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.4 8.9e-41 164.1
Cco08g1786 . 118 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 85.9 7.1e-38 154.5
Cco09g1188 . 83 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 54.8 4.6e-43 172.2
Cco08g1287 . 2 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.3 1.5e-51 200.3
Cco02g1721 . 107 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 2.1e-45 179.9
Cco09g1188 . 84 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 50.5 5.0e-39 158.7
Cco05g0386 . 122 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.7 2.3e-92 336.3
Cco08g1216 . 1 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 54.4 4.5e-80 295.0
Cco05g0504 . 310 487 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 59.6 1.3e-41 167.2
Cco10g0542 . 1 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 67.4 6.9e-65 244.2
Cco05g1689 . 1 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 66.7 1.4e-57 219.9
Cco02g0899 . 4 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 57.5 1.8e-44 176.4
Cco10g1351 . 7 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 58.0 5.5e-60 228.0
Cco10g0563 . 226 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 52.5 4.1e-46 182.6
Cco05g1458 . 41 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 56.3 4.2e-117 418.7
Cco03g0399 . 51 519 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 50.3 6.4e-102 368.2
Cco04g1798 . 111 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 59.9 5.5e-49 191.8
Cco02g1250 . 49 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 50.8 1.0e-47 187.6
Cco10g0563 . 121 433 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 52.2 1.3e-60 230.7
Cco07g1749 . 105 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 57.3 2.2e-58 223.0
Cco03g0397 . 159 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 65.9 1.4e-40 163.7
Cco06g0447 . 38 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 59.4 2.5e-43 172.6
Cco05g0783 . 41 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 55.4 1.4e-38 156.8
Cco06g0447 . 36 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.1 3.0e-46 182.2
Cco05g0783 . 39 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 52.9 4.7e-39 158.3
Cco07g1603 . 23 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.8 2.8e-41 165.2
Cco07g1603 . 21 155 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 65.2 8.6e-40 160.2
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
59073 PF00069 Pkinase 8.40E-47 CL0016 Cco TF
86759 PF00069 Pkinase 8.40E-47 CL0016 Cco PK