Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g1491 ATGGCGTATCCGGTTTGGATTTTTCTTCTTTTCTGTTTCTTCTCTGTGCCGTCCATGGCTGCCACACAGAAGAAGAAGACTTACATCGTGCATATGGCTAAATACCAAATGCCCGAGAGTTTTGAACACCACTTGCACTGGTACGACTCCTCACTCAGATCCGTGTCCGATACTGCTGAGATGATCTATGCTTACAACAACGTCGTTCATGGGTTTTCAACCAGATTGACGGCGGATGAAGCTCAGCGGCTCGAGGCCCAACCTGGGATTCTGGCTGTGGTGCCCGAGATGAGATATGAACTTCACACAACTCGTACTCCGCAGTTTCTTGGACTCGACAAGAATGCAAATCTTTACCCTGAATCCAATTCTGTGTCGGAGGTCATCATCGGAGTTTTGGATACTGGGATTTGGCCGGAGAGTAAAAGCTTCGATGATACTGGGCTTGGACCGATACCGAGTAGCTGGAAGGGCGAGTGTGAATCAGGTACTAATTTCAGTGCGTCGAACTGTAACAGGAAGCTGATTGGAGCTAGATTTTTCTCCAAGGGCTACGAGGCGACTCTCGGTCCGATCGATGAATCGAAAGAATCGAGATCTCCGAGAGATGACGATGGCCATGGAACCCACACCGCTACAACTGCCGCCGGTTCTGTAGTTGAAAACGCGAGCCTATTTGGGTATGCCTCCGGCACCGCCCGTGGGATGGCCGCGCGTGCGAGGGTCGCCGCCTACAAGGTTTGCTGGGCCGGTGGATGTTTCAGCTCCGATATCTTAGCCGCCATTGAAAAGGCTGTGACGGACAATGTTAATGTCCTTTCCTTGTCGCTTGGCGGTGGAGTATCCGATTATTACAAGGACAGTGTTGCCACCGGCGCATTCGCTGCCATGGAGAAAGGCATCCTCATTTCTTGCTCTGCCGGAAATGCCGGCCCCAGTCCTTACAGCTTGTCAAATACGTCTCCATGGATTACAACCGTCGGTGCCGGAACATTAGATCGCGATTTTCCGGCGTACGTCAGTCTTGGTGACGCCAAGAACTTCTCCGGCGTTTCGCTCTATCGAGGCAAGGCATTGCCTGGAACGTTGTTGCCTTTTATTTACGCTGCTAACGCGAGTAACTCTGGTAATGGCAATTTGTGTATGACTGGTACTTTGATCCCTGAAAAAGTCGCCGGAAAGATCGTGTTCTGCGACCGAGGTGTAAACCCTAGGGTTCAGAAAGGTGCGGTCGTCAAAGCTGCAGGTGGAATCGGAATGGTGCTGGCCAATACTGCCGCAAATGGAGAAGAGCTGGTGGCTGACTCTCATCTTCTGCCGGCCACGGCTGTCGGTCAGAAATCCGGCGACATTATACGGAAGTATCTCATTTCGGAGCCCAATCCGACGGTGACGATCTTATTCGAAGGGACTAAATTGGGGATCGAACCATCGCCGGTGGTGGCGGCGTTTAGCTCCCGAGGACCAAATTCGATCACTCCTCAGTTGCTGAAACCCGACATAATAGCCCCTGGCGTCAACATCTTAGCTGGATGGTCAAAATCAGTGGGACCAAGTGGTTTAGCCATTGATGACAGACGAGTGGATTTCAACATTATCTCTGGAACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCCGCTCTGATCAAGGGCGCTCATCCCGATTGGAGTCCGGCGGCGATTCGATCGGCGTTGATGACAACAGCCTACACAGCCTACAAAAACGGCCAAAAGATCCAAGATATCGCCACCGGAAAACCATCCACCGCATTCGATCACGGAGCCGGACACGTCGATCCCGTATCAGCTCTCAATCCGGGTCTTGTTTACGATCTAACGGTGGACGATTACCTAAACTTCCTATGCGCACTCAACTATACTCCGTCGCAGATCAACTCATTGGCAAGGAGAGATTTCACTTGCGACCCCAAGAAGAAGTACAGTGTTAACGATCTCAACTACCCTTCTTTCGCCGTCGTTTTCGACGGCGTATTGGGCGGTGGAGGCAGTGGTTCCAGCGTAGTCAAGCACACCAGAACTCTTACAAACGTCGGCTCCCCAGGAACCTACAAAGTCTCAATCTCGTCGGAGACCAAACTGGTGAAAATCTCTGTCGAGCCGGAATCTTTAAGCTTCACGGGAGCCAATGAGAAGAAGTCATATACAGTCACATTCACCACCGCGACTGGTTCGGCGGCGCCACCCAACGCGGAAGCGTTCGGTCGAATTGAGTGGTCGGACGGGAAGCACGTGGTGGGTAGTCCGATTGCGTTTAGCTGGACATAG 2289 52.16 MAYPVWIFLLFCFFSVPSMAATQKKKTYIVHMAKYQMPESFEHHLHWYDSSLRSVSDTAEMIYAYNNVVHGFSTRLTADEAQRLEAQPGILAVVPEMRYELHTTRTPQFLGLDKNANLYPESNSVSEVIIGVLDTGIWPESKSFDDTGLGPIPSSWKGECESGTNFSASNCNRKLIGARFFSKGYEATLGPIDESKESRSPRDDDGHGTHTATTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWAGGCFSSDILAAIEKAVTDNVNVLSLSLGGGVSDYYKDSVATGAFAAMEKGILISCSAGNAGPSPYSLSNTSPWITTVGAGTLDRDFPAYVSLGDAKNFSGVSLYRGKALPGTLLPFIYAANASNSGNGNLCMTGTLIPEKVAGKIVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPATAVGQKSGDIIRKYLISEPNPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQLLKPDIIAPGVNILAGWSKSVGPSGLAIDDRRVDFNIISGTSMSCPHVSGLAALIKGAHPDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTAFDHGAGHVDPVSALNPGLVYDLTVDDYLNFLCALNYTPSQINSLARRDFTCDPKKKYSVNDLNYPSFAVVFDGVLGGGGSGSSVVKHTRTLTNVGSPGTYKVSISSETKLVKISVEPESLSFTGANEKKSYTVTFTTATGSAAPPNAEAFGRIEWSDGKHVVGSPIAFSWT 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30320425 30322713 - CcPI632755_04g014910.1 Cco04g1491 176716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g1491 762 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Cco04g1491 762 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Cco04g1491 762 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Cco04g1491 762 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Cco04g1491 762 CDD PA_subtilisin_like 339 466 - -
Cco04g1491 762 MobiDBLite consensus disorder prediction 191 209 - -
Cco04g1491 762 Pfam Fibronectin type-III domain 652 758 IPR041469 -
Cco04g1491 762 MobiDBLite consensus disorder prediction 191 214 - -
Cco04g1491 762 FunFam Subtilisin-like protease SBT1.9 16 102 - -
Cco04g1491 762 Pfam Subtilase family 127 578 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco04g1491 762 Pfam PA domain 381 451 IPR003137 -
Cco04g1491 762 ProSiteProfiles Serine proteases, subtilase domain profile. 98 605 - -
Cco04g1491 762 CDD Peptidases_S8_3 99 571 IPR034197 -
Cco04g1491 762 FunFam Subtilisin-like protease SBT1.5 127 349 - -
Cco04g1491 762 Gene3D - 622 761 - -
Cco04g1491 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Cco04g1491 762 Gene3D Peptidase S8/S53 domain 128 618 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco04g1491 762 SUPERFAMILY Subtilisin-like 101 609 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco04g1491 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 757 IPR045051 -
Cco04g1491 762 Gene3D - 333 474 - -
Cco04g1491 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 102 IPR037045 -
Cco04g1491 762 FunFam subtilisin-like protease SBT1.5 333 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1557 Cco-Chr3:30197602 Cco04g1491 Cco-Chr4:30320425 9.60E-233 dispersed
Cco04g1491 Cco-Chr4:30320425 Cco05g0916 Cco-Chr5:7916287 1.10E-231 dispersed
Cco02g1285 Cco-Chr2:24506518 Cco04g1491 Cco-Chr4:30320425 4.50E-214 transposed
Cco04g1491 Cco-Chr4:30320425 Cco08g1821 Cco-Chr8:29245173 8.20E-301 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g1491 - - - 0.0