Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g1691 ATGGCGGATATTCTTAGCGCTTTGAGAGTTCTAATGGCGTCCCATACTCCTCCTCTTGACGCCTTGGTTGTTCCTTCTGAGGACTATCACCAGAGTGAATATGTATCTGCGAGAGATAAACGACGTGAATTTGTGTCAGGTTTCACCGGAAGTGCTGGTCTGGCCCTTGTAACTCAGAGAGAAGCATTACTGTGGACCGATGGGCGGTATTTCCTGCAGGCAATTCAACAGCTTAGTGGTCAGTGGAAACTTATGCGAATGGGAGAGGATCCTTCTGTAGATCTCTGGATGGCTGAGAATCTTCCAGCAGATGCAGCTGTTGGAGTGGATCCTTGGTGTGTGTCAGTGGACACAGCACAAAAATGGATTCACGCATTTTCCAAGAAGCAGCAGAAGCTGGTTCAAACCACCACGAACTTAGTTGATGAAGTTTGGAAGAACCGACCACCACCAGAAATAAATCCTGTTATGATACACCCACTGGAATATACTGGCCGCTCTGTTGAAGATAAGTTGAAGACTTTGAGAACAAGGCTTTCGCAAGAGAAAGCTCATGGTTTAATTGTGACTGGACTTGATGAAGTAGCTTGGTTGTACAACATCCGTGGGAGTGATGTGTCATACTGTCCAGTTGTACATGCATTTGCAATAGTGACACTCAATTCAGCGTTCTTTTATGTGGACAAGAGGAAGGTGTCTGATGAGGTGCGCTTGTACATGGAGCAAAATGGAATTGAAGTTCGGGATTATAGTGCAGTAATAACAGATGTGTCCTTACTTGCATCTAATCAACTTAACTTGTCATCTTTTGTGAAAGGACCTGAAGTTAGGGCTAATATGGAAGTAGAACTCAGTTCGATTGACATAGCAGGATCTAATGGAACTAAAGTAGAAAGCCAGAGTTCTGGCCTCATATGGCTTGATCCTGCCCAATGCTGCTATGTCTTGTATTCTAAACTGAACACTGATAAGGTTCTCCTGCAACATTCGCCATTGGCCCTTGCGAAAGCTCTAAAGAACTCTGTTGAGTTGGATGGACTAAAGAAGGCACACATTCGGGATGGTGCAGCTGTTGTACAATATCTTGTGTGGTTGGACAAACAGCTGCAAGACATTTATGGTGCTGCTGGTTACTTTCGGGAAGGGGATGGAGTGAGGAAGCCCAAACCGTCGGACTCAAAGAAACTAACAGAAGTTAGTGTAAGCGATAAGCTTGAGGCTTTCCGAGCATCAAAGGAGCATTTTAGAGGCCTAAGTTTCCCTACTATTTCATCTGTTGGTTCAAATGCTGCAATTATTCATTATGGACCACAAGCAGAGACATGTGCTGAGTTGGATCCTGAAAGCATCTATCTTTTTGACTCGGGAGCTCAGTATTTGGACGGAACAACTGATATCACGCGGACAGTCCATTTTGGATTACCTTCAGCACATGAGAAAGCTTGTTATACTGCAGTTCTCAAAGGCCATATTGCTTTGGGAAATGCAAGATTTCCAAATGGCACAAATGGCCACTCATTGGACATTCTTGCTCGAGTTCCCTTGTGGAAGGATGGTCTGGATTATCGGCATGGCACTGGCCATGGAATTGGTTCTTTCCTTAATGTTCATGAAGGACCCCATTTAATTAGTTTCAGACCACAGGCTCGAAATGTTCCTCTTCAAGCTTCAATGACTGTTACGGATGAGCCTGGCTATTACGAGGATGGTGCCTTCGGTATTAGGTTGGAGAATGTACTTGTAGTGAAGGATGCCGATACAAAATTTAATTTTGGCGATAAAGGCTACTTATCATTCGAGCACATAACATGGGCACCATACCAAAGAAAGTTGATCAACACAAGTCTTCTCACATCTGAAGAATTGGATTGGGTGAACACTTACCATTCAGAATGCAGGGATATTCTTGCTCCATATTTGGATGAATCCGAGAAGGAGAGCTTGGGGAGGAATCCGAGGAGAAGTCCAGAAAATGCAAAGGTGCTGAGACTCACAATGCTAAAGTGCGTTTTGGTCATAGCTTCATTGATCATTTCCTCCAGTTTTGCACAACATAATCTCCCACCTAAAGAACAATGGCTCACTTTGAGAGGGGAAGAGCCACTAGTTATTGCAAGAGGAGGGTTATCTGGAGTGTTTCCAGAATCAAGCCCTTTTGCAAATCAAATGGCTTTGGTTTCAGGTTTACATAACACAGTTTTGTATTGTAATCTTCAACTCACCAAAGATGCGGTAGGCATTTGCTTAACTGATCTCAGGCTTCAAAATTCAACCAATATTGAAGATGTTTTCCCTGGGGAACATAAGTCTTATAATGTTAATGGAAAGATTATCAAAGGATGGTTTTCTGTTGATTACATGTCTAGGACTCTCTTTAACAAACTCTTGATGATTCAAAGTGTCCTCTCTCGTCCTAGTCTCTATGACGGTACTTTGCCAATTGCGGCTGTCGAAGATGTCATGGGGATTAAACCGACTCAGTTTTGGTTGAATGCCGAGCACGAAGCATTCTACGCTGAGCACAATTTGAGTGTATCATTATACCTTCAAAAGGCATTGAGAATGATGCGAATAAACTTTGTGTCATCTTCAGAGATTGGAATATTGAAAGGGATAAGTGGGAGTGTGAACAAAGCTAGAACAAAGTTGGTCTTCAGATTCTTAGAAGCCACTGAAATAGAACCAACAACAAAGAAAACATATGGTGTACTGGCTCAAGAACTTCCCATGATTAAGACATTTGCCTCAGGAATTCTCGTCAGAAAAGAATACATTTGGCCAATTGGTCAAGACAAGTATGTGCAGCCTGCAACAACTCTCGTCATGGATGCTCATAAGCTTGGCTTGGAAGTTTATGCTTCTGGCTTTGCAAATGATGCCATTGTTGGTTACAATTATAGCTATGATCCAATCCGTGAATACCTTCAGTATTTTGATAATGGCCATTTTGCTGTTGATGGGGTCCTTACTGATTTTTCTCCTGCTGCTTCTCAAGCCGTTGCCTGCTATTCGAGTTTTCGCAACAATGGCAAGCCTCAACCTGGATTAGAGCAAGCATTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTTCCCAGGCTCAACTGACCTTGCTTACCAAAGAGCAATTGATGATGGGGCTGATGTTATTGATTGTTCAGTTCAATTATCAAAAGATGGAGTTCCTTTCTGTATGGATATGGCAGATCTCTTGACAGGTACAACTGTTGTCACTTCTTTCTCAGCTCGAACTACAACTATCCCTGAAGTTCAATCTGAAGCTGGAATCTTCTCTTTTGATCTTACTTGGGCGGAGATTTTGACTCTCAAACCTCAAATTACAAACCCTTTCATGGCTTCTTCTGGCCTTGCTCGTAATCCAGCCTTTAAAAACAAGGGCAAGTTCATGACTCTCCCTGAGTTTCTAGAGTTTGCTAAAGCCAAAGCTGTTTCTGGGATTATGATCAACATCCAAAATGCGGCGTATTTGGCTTCAAAGAAAGGTCTAGACATGGTGGGAACTGTCTCCACTGCCTTAATAAATTCCACTTTTGACAAACAATCAACACAACAAGTTTTCATTAGATCAGATGATACTTCTGTGTTGTCTTTTTTCAAGGCAAAGTTCCCAAGTTTCATTAGAGTTTTAACTGTTGACACAAAGATTGGTGATGCCCCAAAAGATGCTCTTGAAGAGATCAAACGCTATGCCGAAGTTGTAGCTATTCCTCGTGGCTCTATCATTGAAATAACAAACTATTTCACTACCGGCCTCACTAAAGTAGTTGCTGAAATTAAGGCTTCAAATCTCTCTGTCTTTGTTTATGTCATGAGAAATGAATATGTTTCCTTGGCCTTTGATTACTACTCTGAAGCCTCCATGGAAATCTCTACCTTTGTCGACTACTTCCACGTTGATGGCATCATTACCGAATTCCCCAATACTGCTAAACGATACATGACATGTCCGTGCCGACCAACTCAGCTGAACCCGAATGGAGCTCCATATATAATCGTACCGCCTGAAATTGGTTTACTCATGAAAATGGTGGCTCCAGAGGCTAAACCACCTACTGATCCTCCATTGCCGCCATTGGATGCTGATGATGTCATTGATCCACCGCTCCCGGCGGTGGTCGAAACGTCAGCCACCAATCCTTCAGGTGTTGCCGATGGGCCTGCCGCAGCCACCCCATCAGCCGCTGTATCAAATGTTGCTAACTTGTTTCTTTCTTTACTATCAGTTGTTGTGCTTAACTTCTTCATTTCACACTTCTGCATTGTAATAATCAATACTCATTAA 4302 42.82 MADILSALRVLMASHTPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALVTQREALLWTDGRYFLQAIQQLSGQWKLMRMGEDPSVDLWMAENLPADAAVGVDPWCVSVDTAQKWIHAFSKKQQKLVQTTTNLVDEVWKNRPPPEINPVMIHPLEYTGRSVEDKLKTLRTRLSQEKAHGLIVTGLDEVAWLYNIRGSDVSYCPVVHAFAIVTLNSAFFYVDKRKVSDEVRLYMEQNGIEVRDYSAVITDVSLLASNQLNLSSFVKGPEVRANMEVELSSIDIAGSNGTKVESQSSGLIWLDPAQCCYVLYSKLNTDKVLLQHSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKQLQDIYGAAGYFREGDGVRKPKPSDSKKLTEVSVSDKLEAFRASKEHFRGLSFPTISSVGSNAAIIHYGPQAETCAELDPESIYLFDSGAQYLDGTTDITRTVHFGLPSAHEKACYTAVLKGHIALGNARFPNGTNGHSLDILARVPLWKDGLDYRHGTGHGIGSFLNVHEGPHLISFRPQARNVPLQASMTVTDEPGYYEDGAFGIRLENVLVVKDADTKFNFGDKGYLSFEHITWAPYQRKLINTSLLTSEELDWVNTYHSECRDILAPYLDESEKESLGRNPRRSPENAKVLRLTMLKCVLVIASLIISSSFAQHNLPPKEQWLTLRGEEPLVIARGGLSGVFPESSPFANQMALVSGLHNTVLYCNLQLTKDAVGICLTDLRLQNSTNIEDVFPGEHKSYNVNGKIIKGWFSVDYMSRTLFNKLLMIQSVLSRPSLYDGTLPIAAVEDVMGIKPTQFWLNAEHEAFYAEHNLSVSLYLQKALRMMRINFVSSSEIGILKGISGSVNKARTKLVFRFLEATEIEPTTKKTYGVLAQELPMIKTFASGILVRKEYIWPIGQDKYVQPATTLVMDAHKLGLEVYASGFANDAIVGYNYSYDPIREYLQYFDNGHFAVDGVLTDFSPAASQAVACYSSFRNNGKPQPGLEQALVISSNGASGDFPGSTDLAYQRAIDDGADVIDCSVQLSKDGVPFCMDMADLLTGTTVVTSFSARTTTIPEVQSEAGIFSFDLTWAEILTLKPQITNPFMASSGLARNPAFKNKGKFMTLPEFLEFAKAKAVSGIMINIQNAAYLASKKGLDMVGTVSTALINSTFDKQSTQQVFIRSDDTSVLSFFKAKFPSFIRVLTVDTKIGDAPKDALEEIKRYAEVVAIPRGSIIEITNYFTTGLTKVVAEIKASNLSVFVYVMRNEYVSLAFDYYSEASMEISTFVDYFHVDGIITEFPNTAKRYMTCPCRPTQLNPNGAPYIIVPPEIGLLMKMVAPEAKPPTDPPLPPLDADDVIDPPLPAVVETSATNPSGVADGPAAATPSAAVSNVANLFLSLLSVVVLNFFISHFCIVIINTH 1433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32085929 32099569 - CcPI632755_04g016910.1 Cco04g1691 176916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g1691 1433 FunFam Xaa-pro aminopeptidase P 1 145 - -
Cco04g1691 1433 FunFam Xaa-Pro aminopeptidase P 337 653 - -
Cco04g1691 1433 Gene3D Creatinase/methionine aminopeptidase superfamily 337 655 IPR036005 -
Cco04g1691 1433 CDD GDPD_SHV3_repeat_2 1019 1319 - -
Cco04g1691 1433 PANTHER XAA-PRO AMINOPEPTIDASE 1 3 646 IPR050422 -
Cco04g1691 1433 CDD GDPD_SHV3_repeat_1 701 999 - -
Cco04g1691 1433 Pfam Creatinase/Prolidase N-terminal domain 6 138 IPR000587 -
Cco04g1691 1433 Gene3D - 1 145 IPR029149 -
Cco04g1691 1433 ProSiteProfiles GP-PDE domain profile. 701 1000 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco04g1691 1433 Pfam Glycerophosphoryl diester phosphodiesterase family 1026 1315 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco04g1691 1433 FunFam Probable Xaa-Pro aminopeptidase P 146 335 - -
Cco04g1691 1433 SUPERFAMILY Creatinase/aminopeptidase 340 621 IPR036005 -
Cco04g1691 1433 Gene3D - 146 335 IPR029149 -
Cco04g1691 1433 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 524 536 IPR001131 -
Cco04g1691 1433 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 1017 1320 - -
Cco04g1691 1433 Pfam Creatinase/Prolidase N-terminal domain 147 343 - -
Cco04g1691 1433 SUPERFAMILY PLC-like phosphodiesterases 700 998 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco04g1691 1433 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 130 IPR029149 -
Cco04g1691 1433 Gene3D Phosphatidylinositol (PI) phosphodiesterase 699 1000 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco04g1691 1433 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1018 1321 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco04g1691 1433 Pfam Metallopeptidase family M24 348 583 IPR000994 -
Cco04g1691 1433 ProSiteProfiles GP-PDE domain profile. 1019 1320 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco04g1691 1433 CDD APP 346 592 IPR033740 GO:0070006(InterPro)
Cco04g1691 1433 SUPERFAMILY PLC-like phosphodiesterases 1020 1320 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco04g1691 1433 Pfam C-terminal region of peptidase_M24 596 646 IPR032416 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g1698 Cco-Chr2:29738197 Cco04g1691 Cco-Chr4:32085929 5.90E-152 dispersed
Cco04g1691 Cco-Chr4:32085929 Cco09g2295 Cco-Chr9:37189681 1.00E-158 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g1691 K01262 - csv:101216172 1249.19