Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g1755 ATGGCCAAGCTTGTGAGCTTTGTTTTTGTTCTTTCCCTCCTTGCCTTTGCTCCACTCTGTTTCTGTGGCAGAAATAATGGTGGCTTTGGGTCTCTGTACCCTCAATATTATGACCATTCATGCCCCAAAGCTAAGGAAATAGTGAAATCCATTGTGGCAAAGGCTTTTGCCAGAGAAGCTCGTATTGCTGCTTCCATCCTTAGACTTCATTTCCATGATTGTTTTGTTCAGGGGTGTGATGCATCTCTACTGTTGGATAGCAGTGGAAGCATTAGGAGCGAAAAGAATTCAAACCCAAATAGGAACTCAGCTAGAGGATTTGAAGTGATTGATGAAATCAAATCTGCATTGGAGAAAGAGTGCCCACAAACTGTTTCTTGTGCTGATATCTTGGCTTTGGCTGCAAGAGATTCGACTGTCATTACGGGTGGACCGTCTTGGGAGGTTCCATTGGGAAGGAAGGACTCAAGAACTGCGAGTTTGAGTGGCTCCAACAACAACATTCCAGCTCCAAACAATACTTTCCAAACCATTCTCAATAGATTCCAAAACCAAGGGCTTGACATTGTTGATCTTGTTGCCTTATCTGGAAGCCACACCATCGGAAATTCAAGGTGCACCAGCTTCAGGCAAAGGCTATACAACCAAAACGGCAACGGACAACCCGACAAAACCCTTCCGCAGTCGTTCGCGGCGGGGCTCCGCAACCGCTGCCCCAGATCCGGCGGTGACAATAACCTCTTTTTCCTCGACTACGTCAGCCCGACCAAATTCGACAACACCTACTTCAAGAACTTAGTTGGTTTCAAAGGGCTTCTGAACTCCGACCAAGTTCTCCTCACCGAAAACGATGCGTCGGCAGCTTTGGTAAAGAAATATGCCGACAACAGCGAGCTGTTCTTCGAGCAATTCGCCAAATCTATGATCAAAATGGGTAATATTTCCCCATTGACGGGCTCAAATGGAGAAATTAGAAAGACTTGCAGGAAGATCAACAGTTAA 1002 46.01 MAKLVSFVFVLSLLAFAPLCFCGRNNGGFGSLYPQYYDHSCPKAKEIVKSIVAKAFAREARIAASILRLHFHDCFVQGCDASLLLDSSGSIRSEKNSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVITGGPSWEVPLGRKDSRTASLSGSNNNIPAPNNTFQTILNRFQNQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQNGNGQPDKTLPQSFAAGLRNRCPRSGGDNNLFFLDYVSPTKFDNTYFKNLVGFKGLLNSDQVLLTENDASAALVKKYADNSELFFEQFAKSMIKMGNISPLTGSNGEIRKTCRKINS 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32544783 32547184 + CcPI632755_04g017550.1 Cco04g1755 176980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g1755 333 SUPERFAMILY Heme-dependent peroxidases 32 332 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 Gene3D Peroxidase, domain 2 169 312 - -
Cco04g1755 333 Pfam Peroxidase 48 296 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PANTHER PEROXIDASE 72-RELATED 9 331 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 CDD secretory_peroxidase 32 331 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cco04g1755 333 Gene3D - 36 332 - -
Cco04g1755 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cco04g1755 333 FunFam Peroxidase 169 311 - -
Cco04g1755 333 FunFam Peroxidase 35 177 - -
Cco04g1755 333 ProSiteProfiles Plant heme peroxidase family profile. 31 332 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco04g1755 333 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1755 Cco-Chr4:32544783 Cco11g0594 Cco-Chr11:6349590 1.30E-88 dispersed
Cco10g2033 Cco-Chr10:33747393 Cco04g1755 Cco-Chr4:32544783 1.80E-55 dispersed
Cco04g1755 Cco-Chr4:32544783 Cco07g0944 Cco-Chr7:21624347 5.20E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g1755 K00430 - csv:101204648 603.979