Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g1757 ATGCTGCAGAAAATACCAAGCTTTTATGGCAATTTTCAAGTCAGAGCAGCTGTTGAAGATATATTTCATTTGGGATGGATGAGGACATGGGATTGTTTGGTTTCCTTCAAAACATATGGAGCATTCTTTATCAGAACTTTCCATATTTTTTGCCTCGACCTGGAATTGTATTGGTGGATGGATATTTCTTCGTACTTACCTTTGCCGGATATGTGGCAGTGGGAGAATGCCACGGCCGGTGCCCTCGCCGGATTTGCCACCGTCGCCGCCATGCATCCTCTAGATGTCGTCCGCACCCGGTTTCAAGTTTATGATGGCAGAGGATCAAATCTCCCGACTTACAAGAATACGGCTAATGCAATCTTCACTATTACTCGGATGGAGGGCTTGAGAGGGCTATATGCAGGCTTCTATCCTGCAGTTCTCGGGTCATCTGTTTCTTGGGGTTTATATTTCTTTTTCTATGGTAGAGCCAAAGAAAGATATTCTGACAATGGAAAGAAGGACCTGAGTCCTAGTCTTCATCTTGCTTCTGCAGCGGAAGCAGGAGCTTTGGTTTGTTTTTGCACGAATCCAGTTTGGCTTGTGAAAACAAGAATGCAGCTTCAGAGTCCTCTTCATCAAGCTCAACCTTATTCTGGGCTATATGATGCCTTCAGAACCATTTTGAGAGAGGAAGGTTTTGCTGCTCTTTATAAAGGGATTGTTCCTGGCCTTATGCTTCAGGTTTCTCATGGTGCCATTCAATTTACAGTTTATGAAGAACTCCGTAAAGTTATTGCCAACTCGAGGTCTAAAGGGACCAAAGTGGATGCTCAAAGTTCTGGGGAATTACTGAATTCGGGTGATTATGCTGTTCTTGGAGGATCTTCTAAAATTGCTGCCATGCTTCTGACATACCCATTTCAAGTTATTCGAGCTCGATTGCAGCAAAGACCAGGGAATGATGGGATCCCAAGATACATGGATAGCTTCCACGTTCTTAAGGAAACTGCACGGTTTGAGGGCATTCGTGGGTTTTACAGGGGAATTACACCAAACCTTCTAAAGAATGTCCCCGCGGCTTCAATCACATTTATTGTGTACGAAAACCTGATTTCTCAAAGTTGTCGGCGTTTACTTGGAGCTCGTCAGTTATCCATGGTATTGGTGGCAGAAGGAGCTGAGATGGATTCTTTGTGTTTACTAGCAGCCATTTGTTCAACACCATCACAAACAAGTCCAGAGGAGTTATTGTTTTGGGTTCTCTGGTGTTGGTTTTGGTTGAAGAAGAAGCATATTGGAAACAAAGATGGGATTCCTAAAGGGAATTTGGGTTGGCCTTTCTTTGGTGAAACTCTTCAATTCATTTCGTCTGGCTATTCTTCTTGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTATGGGAATGTGTTTAAAACCAACATTTTGGGGACACCCATTATAGTATCAACTGATTCAGAGGTGAATAAGGTTGTTTTACAAAACCATGGGAATATATTTATCCCAGCTTACCCAAAATCAATAACAGAATTACTTGGTACATTTTCAATTCTAAGAATGAATGGAAATGTTCAAAAAAGAGTTCATACAATAATTGGAGCCTTCCTAAGATCCCCTCAACTCAAAGCCCAAATCACACAAGATATTCAAAACACTGTTAAACTTCGACTTGCCAATTGGAATTCCTCTCAATTGGTTTATCTCCAAACTGAAACCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGTGTGGGACCTGGCGAAGAATTGAAGATTTTGAAAAGGGAATTTGAAGAGTTTATCAAAGCTTTGATTTGTATACCCATTAAATTACCCGGAACTAGGCTATATAAATCTTTGAAGGCCAGAGAGAAGCTGTTGAAAATTGTGAGTAAGATTGTGGAAGATCGAAAGTCGAGGGTGGAGGAGAAGGTTGCACCGAGAGATGCGGTGGACGTGCTCTTACAGGATCACGATGAGATTCAAGGGCTACCGTTGGATTTCATCAGCAGTCACATCATAGAGTTGATGATTCCCGGCGAGGAGACGGTGCCGATGGCCATGACCCTCGCCGTCAAGTTTCTCAGTGATTGCCCCCGCGCTCTTGCCCAATTAATGGAAGAGAATATGAAACTGAAGAAGCAGAAGGATGGCTCTGGGGAGGAGTATACGTGGACAGATTACATGTCTCTGCTATTTACTCAAAATGTGATCAGTGAAACATTAAGAATGGCCAATATCATCAATGGGGTTTGGAGAAAAGCTCAAAAAGATGTGCAAATCAAAGGCTATTTAATACCACAAGGATGGTGTGTCTTGGCGTCTTTTATTTCAGTTCATATGGACGACAAGAACTACGCAAACCCACATCAGTTTGATCCATGGAGATGGGAGGAAAATTTGTCTGCAACAAACAACCATAACTTTACACCTTTTGGAGGGGGACAGAGGCTATGTCCTGGCATCGAACTCGCCAGGCTCGAAATCTCAATTTTCCTTCATCATCTCGTCACTACCTACAATGAGGATGAGAAGGAAGCTGCCTATCACAATCACAACGTTAAGCTCTTGATTGGATTCAATCGTCTCAACAACTTCAATACCGAGCTGTCGAGGAAATAA 2637 42.55 MLQKIPSFYGNFQVRAAVEDIFHLGWMRTWDCLVSFKTYGAFFIRTFHIFCLDLELYWWMDISSYLPLPDMWQWENATAGALAGFATVAAMHPLDVVRTRFQVYDGRGSNLPTYKNTANAIFTITRMEGLRGLYAGFYPAVLGSSVSWGLYFFFYGRAKERYSDNGKKDLSPSLHLASAAEAGALVCFCTNPVWLVKTRMQLQSPLHQAQPYSGLYDAFRTILREEGFAALYKGIVPGLMLQVSHGAIQFTVYEELRKVIANSRSKGTKVDAQSSGELLNSGDYAVLGGSSKIAAMLLTYPFQVIRARLQQRPGNDGIPRYMDSFHVLKETARFEGIRGFYRGITPNLLKNVPAASITFIVYENLISQSCRRLLGARQLSMVLVAEGAEMDSLCLLAAICSTPSQTSPEELLFWVLWCWFWLKKKHIGNKDGIPKGNLGWPFFGETLQFISSGYSSCPVTFMDKRKSLYGNVFKTNILGTPIIVSTDSEVNKVVLQNHGNIFIPAYPKSITELLGTFSILRMNGNVQKRVHTIIGAFLRSPQLKAQITQDIQNTVKLRLANWNSSQLVYLQTETKQITFEVLVKVLMSVGPGEELKILKREFEEFIKALICIPIKLPGTRLYKSLKAREKLLKIVSKIVEDRKSRVEEKVAPRDAVDVLLQDHDEIQGLPLDFISSHIIELMIPGEETVPMAMTLAVKFLSDCPRALAQLMEENMKLKKQKDGSGEEYTWTDYMSLLFTQNVISETLRMANIINGVWRKAQKDVQIKGYLIPQGWCVLASFISVHMDDKNYANPHQFDPWRWEENLSATNNHNFTPFGGGQRLCPGIELARLEISIFLHHLVTTYNEDEKEAAYHNHNVKLLIGFNRLNNFNTELSRK 878
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 32550764 32566047 + CcPI632755_04g017570.1 Cco04g1757 176982
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco04g1757 878 ProSiteProfiles Solute carrier (Solcar) repeat profile. 71 161 IPR018108 -
Cco04g1757 878 SUPERFAMILY Mitochondrial carrier 73 365 IPR023395 -
Cco04g1757 878 FunFam folate transporter 1, chloroplastic isoform X1 63 166 - -
Cco04g1757 878 SUPERFAMILY Cytochrome P450 433 846 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 CDD CYP90-like 465 850 - -
Cco04g1757 878 Gene3D Cytochrome P450 423 861 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 73 366 IPR044712 GO:0006862(InterPro)|GO:0008517(PANTHER)|GO:0009941(PANTHER)|GO:0015230(PANTHER)|GO:0022857(PANTHER)|GO:0055085(InterPro)|GO:0055085(PANTHER)|GO:1904947(PANTHER)
Cco04g1757 878 PRINTS E-class P450 group I signature 780 804 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 PRINTS E-class P450 group I signature 814 824 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 PRINTS E-class P450 group I signature 673 690 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 PRINTS E-class P450 group I signature 824 847 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 PRINTS E-class P450 group I signature 466 485 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 Coils Coil 707 727 - -
Cco04g1757 878 FunFam Folate transporter 1, chloroplastic 167 372 - -
Cco04g1757 878 ProSiteProfiles Solute carrier (Solcar) repeat profile. 282 368 IPR018108 -
Cco04g1757 878 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 423 862 - -
Cco04g1757 878 Pfam Cytochrome P450 434 846 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 817 826 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco04g1757 878 Gene3D Mitochondrial carrier domain 158 373 IPR023395 -
Cco04g1757 878 PRINTS P450 superfamily signature 741 752 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 PRINTS P450 superfamily signature 824 835 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 PRINTS P450 superfamily signature 539 552 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 PRINTS P450 superfamily signature 815 824 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco04g1757 878 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 259 IPR018108 -
Cco04g1757 878 Pfam Mitochondrial carrier protein 170 262 IPR018108 -
Cco04g1757 878 Pfam Mitochondrial carrier protein 282 365 IPR018108 -
Cco04g1757 878 Pfam Mitochondrial carrier protein 74 164 IPR018108 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1757 Cco-Chr4:32550764 Cco07g1443 Cco-Chr7:28529488 7.10E-131 dispersed
Cco04g1757 Cco-Chr4:32550764 Cco09g0055 Cco-Chr9:478274 3.90E-137 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g1757 K12637 - csv:101203911 789.26