Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco04g1866 | ATGGAGGATATAGCAGAAGACGAAGACCCAGTAATCGACATCGACAGTATCGATTCCGAGAACCCGCTTGCCGTTGTTGAGTACAATTCAAGCTGTGTTCCCCCAAATTACATGACCAAACAAACTGACATTAATGAAAAGATGAGAGCAATACTAATTGACTGGCTTATAGAGGTGCATGACAAGTTTGATCTCATGGGAGAAACTTTGTTTCTCATTGTGAATCTCAGAGACAGATTTTTGGCAGAAAAAACATTAGCGAGAAAGAAGCTTCAGCTGGTTGGTTTGGTTTCTATGCTTTTAGCTTGCAGATATGAGGAAGTTTCTGTTCCTGTTGTGGGTGATTTGATTCTTATTTCTGATAAAGCTTACTCTAGAAAAGAAGTTCTTGAATGGTACTTACTCCTCCATTTTTAA | 417 | 38.85 | MEDIAEDEDPVIDIDSIDSENPLAVVEYNSSCVPPNYMTKQTDINEKMRAILIDWLIEVHDKFDLMGETLFLIVNLRDRFLAEKTLARKKLQLVGLVSMLLACRYEEVSVPVVGDLILISDKAYSRKEVLEWYLLLHF | 138 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 33318227 | 33318762 | - | CcPI632755_04g018660.1 | Cco04g1866 | 177091 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco04g1866 | 138 | SUPERFAMILY | Cyclin-like | 31 | 135 | IPR036915 | - | |
Cco04g1866 | 138 | PANTHER | CYCLINS | 12 | 134 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cco04g1866 | 138 | SMART | cyclin_7 | 54 | 138 | IPR013763 | - | |
Cco04g1866 | 138 | Gene3D | - | 34 | 137 | - | - | |
Cco04g1866 | 138 | Pfam | Cyclin, N-terminal domain | 30 | 132 | IPR006671 | - | |
Cco04g1866 | 138 | FunFam | G2/mitotic-specific cyclin | 33 | 136 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g1866 | Cco-Chr4:33318227 | Cco11g1919 | Cco-Chr11:31872970 | 2.00E-43 | dispersed | |
Cco04g1862 | Cco-Chr4:33292378 | Cco04g1866 | Cco-Chr4:33318227 | 9.50E-60 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco04g1866 | K21777 | - | csv:101216622 | 229.95 |