Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g1876 ATGCTGCTGGTTTATTATTTGTGTTTGAGTTTGTTGTTGGGGAAATCGTGGGCAGCTGCAGCCGGCGGTGATGGCACCGCGAGGGAGCTCGATCAGACTCCAACGTGGGCTGTTGCTGGTGTTTGTGCAATTATCATCGTTATTTCTATCGCCTTGGAGAAACTCCTTCACAAAGCTGGAACGTGGCTTACGGAAAAGCACAAGAGGGCTCTTTTTGAAGCTCTGGAGAAAGTTAAAGCTGAGCTGATGATTCTGGGTTTCATTTCACTGCTCCTCACCTTCGGACAAAACTATATCATTAAAATTTGCATTCCCACAAAGGTTGCAAATACTATGTTACCATGTGCAGCGGTCAAAGGGGACAAATTGCAAGATGGAGTCGATGAAGGCGAACATCATAGACGGCTTCTATGGTATGAACGCAGGGTCCTGGCTGCTGCTGGTGGCGCTGTTAGTTGCAAGGAAGGTCATGTGCCGCTTATATCTATCTCGGGATTGCATCAGTTGCACTTATTTATCTTCTTCTTAGCCGTATTTCATGTCGTATACAGTGCTATCACAATGATGCTTGGGAGGCTAAAGATTCGAGGTTGGAAGGCATGGGAGGAAGAGACCTCAACTCACAATTATGAATTCTCAAATGATAATGCACGATTCAGGCTTACTCACGAAACATCGTTTGTGAAAGCCCACACAAGTTTTTGGACAAAACTTCCTGTCTTCTTTTATATTGGATGCTTCTTCCGACAATTTTTCAGGTCCGTTGGTAAGGCTGACTACTTGGCGTTACGTAATGGATTCATCGCCGTTCATCTTGCTCCAGGAAGTAAATTTGACTTTCAAAAATATATAAAAAGGTCTCTAGAAGATGACTTCAAAATAATCGTGGGAGTGAGTCCCCTGCTTTGGGCATCGTTTGTCGTCTTCTTGCTCATAAATGTTTATGGATGGCAAGCATTGTTTTGGACATCCTTAGTCCCTGTGATTATAATCCTGGCTGTTGGAACAAAGCTTCAAGGAATTATGACAAAAATGGCTCTTGAGATTACAGAAAGACATGCTGTTGTGCAAGGAATTCCTCTTGTTCAGGCATCAGATAAATATTTTTGGTTTGGCAAGCCTCAGCTGGTTCTTTACCTCATCCACTTCGCTTTATTTTCGAATGCATTCCAAATAACATACTTCTTCTGGATTTGGTATTCCTTTGGGCTAAAATCCTGCTTCCATACTGATTTCAAGCTAGCAATCGTAAAAGTTGCTCTCGGGGTTGGCGTTCTCTGTCTTTGCAGTTATATTACTCTTCCACTCTATGCTCTTGTGACTCAGATGGGTACGCGTATGAAGAAATCGATCTTTGACGAACAAACATCTAAGGCCCTCAAGAAGTGGCACATGGCTGTTAAGAAGCGACATGGAAAGTCCCCAACTCGAAAGCTAGGGAGTCCAAATGCGTCGCCAATGCATTCATCATCTGGATACACATTGCATCGATTCAAGACTACAGGTCACTCAAACAGATCATCAATGTACGACGAAAATGATGCATCTGATTACGAAGTTGATCTGTTGTCGCCTAAAGTTGATACTCCAAATTTTACGGTTAGAATAGACCGCGCCAATGAACATCAAACTGAAATAATTGAATCCCAGCATACAGAAAAAAGGAATGAAGACGATTTCTCATTTGCCAAGCCTGGACCAACGAAAGGACCATGA 1716 42.95 MLLVYYLCLSLLLGKSWAAAAGGDGTARELDQTPTWAVAGVCAIIIVISIALEKLLHKAGTWLTEKHKRALFEALEKVKAELMILGFISLLLTFGQNYIIKICIPTKVANTMLPCAAVKGDKLQDGVDEGEHHRRLLWYERRVLAAAGGAVSCKEGHVPLISISGLHQLHLFIFFLAVFHVVYSAITMMLGRLKIRGWKAWEEETSTHNYEFSNDNARFRLTHETSFVKAHTSFWTKLPVFFYIGCFFRQFFRSVGKADYLALRNGFIAVHLAPGSKFDFQKYIKRSLEDDFKIIVGVSPLLWASFVVFLLINVYGWQALFWTSLVPVIIILAVGTKLQGIMTKMALEITERHAVVQGIPLVQASDKYFWFGKPQLVLYLIHFALFSNAFQITYFFWIWYSFGLKSCFHTDFKLAIVKVALGVGVLCLCSYITLPLYALVTQMGTRMKKSIFDEQTSKALKKWHMAVKKRHGKSPTRKLGSPNASPMHSSSGYTLHRFKTTGHSNRSSMYDENDASDYEVDLLSPKVDTPNFTVRIDRANEHQTEIIESQHTEKRNEDDFSFAKPGPTKGP 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 33377143 33381756 + CcPI632755_04g018760.1 Cco04g1876 177101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g1876 571 PANTHER MLO-LIKE PROTEIN 1 25 546 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco04g1876 571 MobiDBLite consensus disorder prediction 542 562 - -
Cco04g1876 571 MobiDBLite consensus disorder prediction 466 498 - -
Cco04g1876 571 MobiDBLite consensus disorder prediction 478 498 - -
Cco04g1876 571 MobiDBLite consensus disorder prediction 542 571 - -
Cco04g1876 571 Pfam Mlo family 28 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g0237 Cco-Chr3:2541930 Cco04g1876 Cco-Chr4:33377143 1.40E-143 dispersed
Cco04g1876 Cco-Chr4:33377143 Cco08g1081 Cco-Chr8:22604995 5.60E-161 dispersed
Cco10g0012 Cco-Chr10:197771 Cco04g1876 Cco-Chr4:33377143 4.90E-197 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g1876 K08472 - csv:101212923 1037.33