Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco04g2133 | ATGAAAGCCGACCCATTTCTCGATCAAAGAGTTCGTTCCCATGTCGCTGATATAAGCACTTCGTTTGCGAAGATGGGTTCTGGTCGTTGGTTTAAGGCAGTAATTCGCTTAAAGAAAGTGAAAACCTGCAGTTCAAAACAAATTAAGGAGAAATTGGATGATTTGCAAAAAGATTCCCCAAGGTTTAAAAATGGTGGCACCAAAGGGAATAGTAAGTCTCTTGGGATGCCAATTGAAGATGTAGCGGCAGTTCGGATTCAGACAGCATACCGAGCATATCGTGCCAGGAAAAATTTACGTCGCTTGAAAGGGGCCTTCAGACTGCAGAATCTGACTCAAGGCAATTCCGTTAGAAAGCATGCTACATCTACATTAGGTTATCTTCATTCATGGAGCAATATACAGGCTCAAATTAGGGCTCGTCGACTTTGTATGGTGACAGAAGGACGACTAAGACAAAAAAGATTAGAAAATCAACGAAAACTTGAGGCTAAGCTTCATCATATAGAGGTGGAGTGGTGTGGGGGTGCAGACTCCATGGATGGGATTCTTTCGAGGATACATGAGAGAGAAGAAGCGGCGGTTAAGCGCGAGCGTGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAATGAGATGTATGGGTTGGGTAAAGATGAACTTGGTAAAGCTGATTGGGGTTGGAGCTGGAAAGAACGATGGATAGCTGCTCGTCCATGGGAAAGCCGTGTACCATCTCAGTTTGATAGTCCAAAGAAATCTACAATTAGGCAATCAAGCAAAGTCAGTAAGAGAAACTCGCCATCCCCTAAAGCACGAGTTTCAATTAAACCTCCTTCCCCAAATGTGAAATCAACTTCAAAGGCTCGAAGGTTGTCTTATCCAGCAACCGAGAAAACCGAAAAACTGGCTACAGAAGAAAAAGGCGTCAAAGAAAGCAAAGCCAGAGAGAAGAAAATAAAAGATGCAGAAGCCATTTGTTTTCTGTATGTCATTTCTGACGATGTTCATTCAGGGAGTGGTGTGAGCTGGAGGAGAAGGCCAAAGCCCGGCAATTGTTGTAGAAGGCTATCGAAACCATCTCTGTACACTACTCGGATCTCAAAACTTATGGATTCTTCTGCGGACTCTTCTGGGTGCTCAAAAAGACTAGTCGCTTTGGCACAGCAACTCCGCCTTTACAAACCGCCTCTATTGTTGGACGACATAGAGGAGCCAAGCAGTGAGGAGAGCAATGGAAAGGTTGTTTCTCAAGTGGGTTTCCCTGAATCAGCCACCCCAATTTCTCGAGACCCAGAGAGATTCAGACCCAAGAGAGCGGCTGTGTTGATTTGCCTTTTTGAAGGGAATGATGGCGATCTGCGGGTCATTCTCACCAAACGATCCTCGAGGTTGTCTACTCACTCGGGTGAAGTTGCATTGCCTGGAGGAAAAGCAGAGGAAGGAGATGAAGACGATGGGGCGACTGCGACGAGAGAAGCAAAGGAGGAGATTGGCTTGGATCCTTCGCTTGTAAATGTTGTTACTGTTCTCGAACCATTCTTGTCTAAACATCTCCTAAGAGTGGTTCCTGTTATCGGCATTATGAATGAAAGAAATGCATTCAGTCCCAGGCCGAATCCTGCTGAAGTGGATGAAGTATTTGATGCTCCACTTGATATGTTTATTAAGGATGAAAATCGGAGGTCGGAGGAAAGAGAGTGGATGGGATGCAAATACCTTGTTCATTTCTTTGATTACGAAACCGAGAATAAGAAATATGTGATATGGGGTTTAACTGCTGGGATCTTGATAAGGGCTGCATCAATAGTACTCCAAAGCTCACCACCTTTTCTGGAGCAAAACCCTATCTTCAAGGTGGAAGATTCCAAAGATTATTGCACTCATTTGGAGCCAAAAATAAAATTCCTGAATAGAGGAAGACACCAGTATCATGTGCTGAGAAAGTTATCTTTGAGAGTGAATGCTCGGAACAAACTTGCTGCAGTTGCCGGCATATCATCTTCAATGAACGTGATTCATGGCATAGAGAGCTTAAGCAGCCGTCCATTAACAGGGCTGGCAGGTCTACCCGGGTTCACAACTCATTCTATTAGATGA | 2109 | 44.48 | MKADPFLDQRVRSHVADISTSFAKMGSGRWFKAVIRLKKVKTCSSKQIKEKLDDLQKDSPRFKNGGTKGNSKSLGMPIEDVAAVRIQTAYRAYRARKNLRRLKGAFRLQNLTQGNSVRKHATSTLGYLHSWSNIQAQIRARRLCMVTEGRLRQKRLENQRKLEAKLHHIEVEWCGGADSMDGILSRIHEREEAAVKRERAMAYAFSHQWRANSNEMYGLGKDELGKADWGWSWKERWIAARPWESRVPSQFDSPKKSTIRQSSKVSKRNSPSPKARVSIKPPSPNVKSTSKARRLSYPATEKTEKLATEEKGVKESKAREKKIKDAEAICFLYVISDDVHSGSGVSWRRRPKPGNCCRRLSKPSLYTTRISKLMDSSADSSGCSKRLVALAQQLRLYKPPLLLDDIEEPSSEESNGKVVSQVGFPESATPISRDPERFRPKRAAVLICLFEGNDGDLRVILTKRSSRLSTHSGEVALPGGKAEEGDEDDGATATREAKEEIGLDPSLVNVVTVLEPFLSKHLLRVVPVIGIMNERNAFSPRPNPAEVDEVFDAPLDMFIKDENRRSEEREWMGCKYLVHFFDYETENKKYVIWGLTAGILIRAASIVLQSSPPFLEQNPIFKVEDSKDYCTHLEPKIKFLNRGRHQYHVLRKLSLRVNARNKLAAVAGISSSMNVIHGIESLSSRPLTGLAGLPGFTTHSIR | 702 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 35160524 | 35169296 | + | CcPI632755_04g021330.1 | Cco04g2133 | 177358 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco04g2133 | 702 | MobiDBLite | consensus disorder prediction | 471 | 498 | - | - | |
Cco04g2133 | 702 | Gene3D | - | 30 | 127 | - | - | |
Cco04g2133 | 702 | CDD | CoAse | 441 | 601 | IPR045121 | GO:0010945(InterPro) | |
Cco04g2133 | 702 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 426 | 605 | - | - | |
Cco04g2133 | 702 | MobiDBLite | consensus disorder prediction | 247 | 317 | - | - | |
Cco04g2133 | 702 | PANTHER | NUDIX HYDROLASE | 384 | 622 | IPR045121 | GO:0010945(InterPro)|GO:0015938(PANTHER) | |
Cco04g2133 | 702 | Pfam | NUDIX domain | 441 | 551 | IPR000086 | - | |
Cco04g2133 | 702 | ProSiteProfiles | IQ motif profile. | 79 | 107 | - | - | |
Cco04g2133 | 702 | ProSiteProfiles | Nudix hydrolase domain profile. | 440 | 596 | IPR000086 | - | |
Cco04g2133 | 702 | SUPERFAMILY | Nudix | 438 | 600 | IPR015797 | - | |
Cco04g2133 | 702 | MobiDBLite | consensus disorder prediction | 297 | 317 | - | - | |
Cco04g2133 | 702 | MobiDBLite | consensus disorder prediction | 282 | 296 | - | - | |
Cco04g2133 | 702 | FunFam | Nudix hydrolase 11 | 422 | 605 | - | - | |
Cco04g2133 | 702 | MobiDBLite | consensus disorder prediction | 250 | 273 | - | - | |
Cco04g2133 | 702 | MobiDBLite | consensus disorder prediction | 480 | 498 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g2133 | Cco-Chr4:35160524 | Cco09g2240 | Cco-Chr9:36699663 | 2.50E-33 | dispersed | |
Cco07g1069 | Cco-Chr7:24212594 | Cco04g2133 | Cco-Chr4:35160524 | 6.50E-53 | transposed | |
Cco03g0659 | Cco-Chr3:6735131 | Cco04g2133 | Cco-Chr4:35160524 | 3.10E-40 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco04g2133 | - | - | - | 0.0 |