Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g2193 ATGTCCAAGCCTTATCAGTCACCACTCACAAGAATGATTAGGGGAAAAGGAAAGCTCTTTTCCTCATCAGGTAAGTTGCAAATAAAGGGGTTCCAGAATCAAGAAGAGAAGATGTCAGACTCACCTCAGAGGAAGATGGGAAGAGGAAAGATTGAGATTAAGAGGATCGAAAATACAACAAATCGTCAAGTCACTTTCTGTAAGAGAAGAAATGGGTTGCTCAAAAAAGCGTATGAACTTTCTGTTCTATGTGATGCTGAAGTTGCTCTCATCGTTTTCTCAAGCCGTGGCCGCCTCTATGAGTATGCTAACAACAGTGTGAAGGCAACAATTGATAGGTACAAGAAGGCATCCTCAGATTCCACCAACACTGGATCTACTTCTGAAGCTAACACTCAGTTTTACCAACAAGAAGCTGCCAAACTCCGAGTTCAGATTGGTAACTTACAGAACTCAAACAGGAACATGTTGGGCGAGTCTTTAAGTTCTTTGAGTGTAAAAGATCTGAGAAGCCTGGAGAGCAAACTTGAGAAAGGAATTAGCAGAATTAGGTCCAAAAAGAATGAACTCCTCTTTGCTGAAATTGAGTATATGCGAAAAAGGGAAATTGATTTGCACAACAACAATCAGCTGCTTCGAGCAAAGATAGCTGAGAGCGAAAGAAATGTGAACATGATGGGAGGAGAATTTGAGCTGATGCAATCTCATCCGTACGATCCAAGAGACTTCTTCCAAGTGAACGGCTTACAACATAATCATCAATATCCACGCCAAGACAACATGGCTCTTCACACTCTGATTGGTGGATTGGATTATATTATAAGGAGTGCTGGCCATTTGCCGATTGAAAGTCTCAACTTTCTCTGA 867 41.41 MSKPYQSPLTRMIRGKGKLFSSSGKLQIKGFQNQEEKMSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIDRYKKASSDSTNTGSTSEANTQFYQQEAAKLRVQIGNLQNSNRNMLGESLSSLSVKDLRSLESKLEKGISRIRSKKNELLFAEIEYMRKREIDLHNNNQLLRAKIAESERNVNMMGGEFELMQSHPYDPRDFFQVNGLQHNHQYPRQDNMALHTLIGGLDYIIRSAGHLPIESLNFL 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35570562 35577419 + CcPI632755_04g021930.1 Cco04g2193 177418

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g2193 288 PRINTS MADS domain signature 48 68 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco04g2193 288 PRINTS MADS domain signature 83 104 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco04g2193 288 PRINTS MADS domain signature 68 83 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco04g2193 288 FunFam agamous-like MADS-box protein AGL11 58 141 - -
Cco04g2193 288 CDD MADS_MEF2_like 47 121 IPR033896 GO:0000977(InterPro)|GO:0045944(InterPro)
Cco04g2193 288 SMART madsneu2 46 105 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco04g2193 288 SUPERFAMILY SRF-like 47 123 IPR036879 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco04g2193 288 PANTHER SERUM RESPONSE FACTOR HOMOLOG 46 241 IPR050142 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Cco04g2193 288 Coils Coil 169 189 - -
Cco04g2193 288 Pfam K-box region 128 216 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cco04g2193 288 ProSiteProfiles K-box domain profile. 132 222 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cco04g2193 288 Gene3D - 58 140 IPR036879 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco04g2193 288 ProSiteProfiles MADS-box domain profile. 46 106 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco04g2193 288 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 55 102 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco04g2193 288 ProSitePatterns MADS-box domain signature. 48 102 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g2193 K09264 - - csv:101221430 450.669
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1582 Cco-Chr4:31196782 Cco04g2193 Cco-Chr4:35570562 3.90E-36 dispersed
Cco04g2193 Cco-Chr4:35570562 Cco08g0096 Cco-Chr8:1584628 1.20E-71 dispersed
Cco04g0488 Cco-Chr4:15779386 Cco04g2193 Cco-Chr4:35570562 1.70E-32 transposed
Cco02g1961 Cco-Chr2:32534100 Cco04g2193 Cco-Chr4:35570562 6.70E-56 wgd
Cco03g0720 Cco-Chr3:7396523 Cco04g2193 Cco-Chr4:35570562 3.00E-79 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g290 . . . . . . . Bma01g01473 Cmo13g00604 . Cma03g01355 Cma07g00152 Car03g01215 Car07g00131 . . Cpe10g00122 Bhi03g00010 . . . Hepe04g1949 . . Cla01g02351 Cam01g2468 Cec04g2114 Cco04g2193 Clacu01g2487 Cmu01g2353 Cre04g2020 . Cone5ag1630 Cone6ag0933 Cone9ag0936 Lsi01g00205 Csa06g03736 Chy12g00045 Cme08g00190 . Blo14g00862 . . . . . . . Cmo03g01352 . Cma13g00575 . Car13g00458 . Cpe19g01096 Cpe20g00485 . . . . . . . Cla03g00684 Cam03g0710 Cec03g0683 Cco03g0720 Clacu03g0731 Cmu03g1323 Cre03g0993 Lsi02g00845 Csa01g02284 Chy02g00197 Cme12g01251
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cco03g0720 . 12 234 MADS-box Gene Family AT3G58780 65.5 2.1e-75 279.3
Cco04g2193 . 44 266 MADS-box Gene Family AT3G58780 63.1 4.4e-73 271.6
Cco08g0096 . 1 222 MADS-box Gene Family AT3G58780 60.9 4.9e-72 268.1
Cco02g1961 . 60 267 MADS-box Gene Family AT3G58780 63.2 9.8e-65 243.8
Cco01g1749 . 1 245 MADS-box Gene Family AT1G26310 56.1 1.9e-68 256.1
Cco08g1207 . 1 178 MADS-box Gene Family AT1G26310 71.3 8.9e-66 247.3
Cco07g1681 . 1 235 MADS-box Gene Family AT1G26310 55.5 7.0e-63 237.7
Cco08g1206 . 1 180 MADS-box Gene Family AT1G26310 54.6 1.1e-44 177.2
Cco07g1680 . 1 173 MADS-box Gene Family AT1G26310 54.5 4.0e-42 168.7
Cco06g0023 . 1 158 MADS-box Gene Family AT1G26310 59.2 5.3e-42 168.3
Cco01g1750 . 1 174 MADS-box Gene Family AT1G26310 54.2 7.6e-41 164.5
Cco08g0096 . 1 223 MADS-box Gene Family AT4G09960 75.2 8.9e-89 323.6
Cco03g0720 . 20 197 MADS-box Gene Family AT4G09960 74.7 9.5e-67 250.4
Cco04g2193 . 46 221 MADS-box Gene Family AT4G09960 74.4 9.5e-67 250.4
Cco02g1961 . 60 216 MADS-box Gene Family AT4G09960 66.2 4.3e-51 198.4
Cco08g0104 . 1 201 MADS-box Gene Family AT1G71692 57.6 2.5e-58 222.2
Cco06g0023 . 1 241 MADS-box Gene Family AT3G61120 56.1 6.7e-63 237.7
Cco07g1680 . 1 173 MADS-box Gene Family AT3G61120 53.8 1.1e-41 167.2
Cco06g0210 . 1 170 MADS-box Gene Family AT3G61120 55.8 1.9e-41 166.4
Cco01g1749 . 1 168 MADS-box Gene Family AT3G61120 51.5 3.7e-37 152.1
Cco08g1206 . 1 173 MADS-box Gene Family AT3G61120 50.9 3.7e-37 152.1
Cco01g0335 . 1 208 MADS-box Gene Family AT4G11880 59.2 3.8e-57 218.4
Cco05g0237 . 9 222 MADS-box Gene Family AT4G11880 53.4 1.3e-49 193.4
Cco06g0024 . 1 218 MADS-box Gene Family AT4G11880 53.4 1.1e-48 190.3
Cco05g0928 . 1 189 MADS-box Gene Family AT4G11880 56.5 2.7e-42 169.1
Cco01g0562 . 1 210 MADS-box Gene Family AT4G11880 51.8 7.8e-42 167.5
Cco10g1206 . 1 249 MADS-box Gene Family AT5G13790 54.4 1.0e-56 217.2
Cco10g0961 . 29 255 MADS-box Gene Family AT2G22630 52.0 2.2e-55 212.6
Cco04g1582 . 1 160 MADS-box Gene Family AT2G22630 67.5 1.2e-53 206.8
Cco01g0335 . 1 210 MADS-box Gene Family AT4G22950 60.6 2.8e-60 228.8
Cco05g0237 . 9 224 MADS-box Gene Family AT4G22950 53.3 3.7e-52 201.8
Cco06g0024 . 1 218 MADS-box Gene Family AT4G22950 54.3 3.7e-52 201.8
Cco05g0928 . 1 189 MADS-box Gene Family AT4G22950 55.8 1.1e-43 173.7
Cco01g0562 . 1 210 MADS-box Gene Family AT4G22950 51.6 2.6e-42 169.1
Cco08g0096 . 1 164 MADS-box Gene Family AT4G22950 51.8 2.6e-37 152.5
Cco07g1680 . 1 246 MADS-box Gene Family AT5G15800 73.4 8.2e-99 357.1
Cco06g0210 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.2e-73 273.5
Cco01g1750 . 1 253 MADS-box Gene Family AT5G15800 53.8 5.0e-64 241.5
Cco08g1206 . 1 173 MADS-box Gene Family AT5G15800 69.5 1.8e-58 223.0
Cco01g1749 . 1 174 MADS-box Gene Family AT5G15800 53.4 2.4e-42 169.5
Cco07g1681 . 1 175 MADS-box Gene Family AT5G15800 54.3 9.2e-42 167.5
Cco08g1207 . 1 176 MADS-box Gene Family AT5G15800 54.5 1.2e-41 167.2
Cco05g0921 . 1 171 MADS-box Gene Family AT5G15800 54.0 6.6e-40 161.4
Cco06g0024 . 1 162 MADS-box Gene Family AT2G45660 71.0 8.3e-54 206.8
Cco05g0237 . 9 168 MADS-box Gene Family AT2G45660 68.1 1.7e-51 199.1
Cco01g0335 . 1 158 MADS-box Gene Family AT2G45660 65.8 9.5e-50 193.4
Cco01g0562 . 1 158 MADS-box Gene Family AT2G45660 65.8 2.4e-45 178.7
Cco05g0928 . 1 157 MADS-box Gene Family AT2G45660 60.5 5.0e-43 171.0
Cco10g0961 . 29 256 MADS-box Gene Family AT4G37940 51.8 2.7e-55 212.2
Cco04g1582 . 1 155 MADS-box Gene Family AT4G37940 67.1 2.1e-52 202.6
Cco04g1600 . 116 338 MADS-box Gene Family AT2G22540 63.7 2.1e-69 259.2
Cco08g1324 . 1 225 MADS-box Gene Family AT2G22540 56.5 3.8e-58 221.9
Cco10g0939 . 25 179 MADS-box Gene Family AT2G22540 59.0 3.4e-43 172.2
Cco04g1600 . 116 342 MADS-box Gene Family AT4G24540 57.5 4.8e-60 228.0
Cco08g1324 . 1 225 MADS-box Gene Family AT4G24540 56.8 2.2e-57 219.2
Cco10g0939 . 25 199 MADS-box Gene Family AT4G24540 53.4 6.3e-44 174.5
Cco07g1680 . 1 171 MADS-box Gene Family AT2G03710 66.9 1.1e-57 219.9
Cco08g1206 . 1 171 MADS-box Gene Family AT2G03710 65.1 7.2e-57 217.2
Cco06g0210 . 1 176 MADS-box Gene Family AT2G03710 63.8 2.6e-54 208.8
Cco01g1750 . 1 172 MADS-box Gene Family AT2G03710 63.6 3.7e-53 204.9
Cco06g0023 . 1 169 MADS-box Gene Family AT2G03710 54.7 6.0e-43 171.0
Cco07g1681 . 1 173 MADS-box Gene Family AT2G03710 51.7 4.0e-39 158.3
Cco07g1680 . 1 170 MADS-box Gene Family AT3G02310 86.5 6.7e-77 283.9
Cco06g0210 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.3e-67 253.1
Cco01g1750 . 1 171 MADS-box Gene Family AT3G02310 67.3 6.3e-59 224.2
Cco08g1206 . 1 170 MADS-box Gene Family AT3G02310 66.7 1.9e-55 212.6
Cco06g0023 . 1 168 MADS-box Gene Family AT3G02310 61.4 2.3e-48 189.1
Cco08g1207 . 1 181 MADS-box Gene Family AT3G02310 53.6 7.8e-41 164.1
Cco07g1681 . 1 187 MADS-box Gene Family AT3G02310 51.3 1.0e-40 163.7
Cco05g0921 . 1 187 MADS-box Gene Family AT3G02310 51.0 4.3e-39 158.3
Cco01g0562 . 1 145 MADS-box Gene Family AT5G62165 68.3 3.9e-48 188.0
Cco05g0928 . 1 146 MADS-box Gene Family AT5G62165 64.4 4.7e-46 181.0
Cco06g0024 . 1 154 MADS-box Gene Family AT5G62165 55.2 1.6e-41 166.0
Cco05g0237 . 9 152 MADS-box Gene Family AT5G62165 62.5 2.0e-41 165.6
Cco01g0335 . 1 153 MADS-box Gene Family AT5G62165 55.6 6.0e-41 164.1
Cco10g0961 . 29 263 MADS-box Gene Family AT2G14210 53.8 1.7e-55 213.0
Cco04g1582 . 1 142 MADS-box Gene Family AT2G14210 66.4 9.4e-46 180.6
Cco03g0720 . 15 200 MADS-box Gene Family AT2G42830 72.9 5.8e-70 261.2
Cco08g0096 . 1 179 MADS-box Gene Family AT2G42830 72.9 1.3e-69 260.0
Cco04g2193 . 44 266 MADS-box Gene Family AT2G42830 61.9 1.6e-67 253.1
Cco02g1961 . 60 267 MADS-box Gene Family AT2G42830 62.0 4.6e-59 224.9
Cco06g0023 . 1 245 MADS-box Gene Family AT2G45650 64.7 1.4e-82 303.1
Cco07g1680 . 1 246 MADS-box Gene Family AT2G45650 50.4 2.0e-54 209.5
Cco05g0921 . 1 172 MADS-box Gene Family AT2G45650 58.6 2.2e-48 189.5
Cco08g1206 . 1 195 MADS-box Gene Family AT2G45650 51.2 2.9e-45 179.1
Cco07g1681 . 1 169 MADS-box Gene Family AT2G45650 53.3 4.9e-40 161.8
Cco08g0096 . 1 164 MADS-box Gene Family AT2G45650 53.0 4.9e-40 161.8
Cco08g1207 . 1 177 MADS-box Gene Family AT2G45650 52.0 2.7e-38 156.0
Cco04g2225 . 84 200 MADS-box Gene Family AT1G29960 54.7 1.7e-38 155.6
Cco01g1749 . 63 188 MADS-box Gene Family AT1G69120 67.7 1.7e-40 162.9
Cco08g1207 . 63 179 MADS-box Gene Family AT1G69120 70.1 2.3e-37 152.5
Cco05g0928 . 1 145 MADS-box Gene Family AT5G51870 57.2 4.4e-41 164.9
Cco01g0562 . 1 144 MADS-box Gene Family AT5G51870 56.6 3.5e-38 155.2
Cco01g1749 . 1 239 MADS-box Gene Family AT3G30260 52.0 3.4e-54 208.8
Cco07g1681 . 1 239 MADS-box Gene Family AT3G30260 51.8 3.0e-50 195.7
Cco08g1207 . 1 178 MADS-box Gene Family AT3G30260 58.4 2.0e-46 183.0
Cco01g1749 . 63 241 MADS-box Gene Family AT5G60910 56.1 1.5e-43 172.9
Cco06g0210 . 1 242 MADS-box Gene Family AT1G24260 72.9 7.7e-88 320.5
Cco07g1680 . 1 245 MADS-box Gene Family AT1G24260 59.8 5.5e-70 261.2
Cco01g1750 . 1 252 MADS-box Gene Family AT1G24260 50.6 2.3e-55 212.6
Cco08g1206 . 1 156 MADS-box Gene Family AT1G24260 66.9 4.9e-50 194.9
Cco01g1749 . 1 157 MADS-box Gene Family AT1G24260 54.3 7.8e-40 161.0
Cco08g1207 . 1 159 MADS-box Gene Family AT1G24260 53.8 7.8e-40 161.0
Cco05g0921 . 1 171 MADS-box Gene Family AT1G24260 51.1 2.8e-37 152.5
Cco05g2100 . 1 246 MADS-box Gene Family AT3G54340 56.1 2.1e-66 249.2
Cco11g1650 . 312 450 MADS-box Gene Family AT5G20240 71.9 2.3e-53 205.3
Cco11g1650 . 312 450 MADS-box Gene Family AT5G20240 71.9 2.3e-53 205.3
Cco05g2100 . 1 246 MADS-box Gene Family AT3G54340 56.1 2.1e-66 249.2
Cco03g0720 . 12 234 MADS-box Gene Family AT3G58780 65.5 2.1e-75 279.3
Cco04g2193 . 44 266 MADS-box Gene Family AT3G58780 63.1 4.4e-73 271.6
Cco08g0096 . 1 222 MADS-box Gene Family AT3G58780 60.9 4.9e-72 268.1
Cco02g1961 . 60 267 MADS-box Gene Family AT3G58780 63.2 9.8e-65 243.8
Cco07g1680 . 1 246 MADS-box Gene Family AT5G15800 73.4 8.2e-99 357.1
Cco06g0210 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.2e-73 273.5
Cco01g1750 . 1 253 MADS-box Gene Family AT5G15800 53.8 5.0e-64 241.5
Cco08g1206 . 1 173 MADS-box Gene Family AT5G15800 69.5 1.8e-58 223.0
Cco01g1749 . 1 174 MADS-box Gene Family AT5G15800 53.4 2.4e-42 169.5
Cco07g1681 . 1 175 MADS-box Gene Family AT5G15800 54.3 9.2e-42 167.5
Cco08g1207 . 1 176 MADS-box Gene Family AT5G15800 54.5 1.2e-41 167.2
Cco05g0921 . 1 171 MADS-box Gene Family AT5G15800 54.0 6.6e-40 161.4
Cco07g1680 . 1 171 MADS-box Gene Family AT2G03710 66.9 1.1e-57 219.9
Cco08g1206 . 1 171 MADS-box Gene Family AT2G03710 65.1 7.2e-57 217.2
Cco06g0210 . 1 176 MADS-box Gene Family AT2G03710 63.8 2.6e-54 208.8
Cco01g1750 . 1 172 MADS-box Gene Family AT2G03710 63.6 3.7e-53 204.9
Cco06g0023 . 1 169 MADS-box Gene Family AT2G03710 54.7 6.0e-43 171.0
Cco07g1681 . 1 173 MADS-box Gene Family AT2G03710 51.7 4.0e-39 158.3
Cco07g1680 . 1 170 MADS-box Gene Family AT3G02310 86.5 6.7e-77 283.9
Cco06g0210 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.3e-67 253.1
Cco01g1750 . 1 171 MADS-box Gene Family AT3G02310 67.3 6.3e-59 224.2
Cco08g1206 . 1 170 MADS-box Gene Family AT3G02310 66.7 1.9e-55 212.6
Cco06g0023 . 1 168 MADS-box Gene Family AT3G02310 61.4 2.3e-48 189.1
Cco08g1207 . 1 181 MADS-box Gene Family AT3G02310 53.6 7.8e-41 164.1
Cco07g1681 . 1 187 MADS-box Gene Family AT3G02310 51.3 1.0e-40 163.7
Cco05g0921 . 1 187 MADS-box Gene Family AT3G02310 51.0 4.3e-39 158.3
Cco03g0720 . 15 200 MADS-box Gene Family AT2G42830 72.9 5.8e-70 261.2
Cco08g0096 . 1 179 MADS-box Gene Family AT2G42830 72.9 1.3e-69 260.0
Cco04g2193 . 44 266 MADS-box Gene Family AT2G42830 61.9 1.6e-67 253.1
Cco02g1961 . 60 267 MADS-box Gene Family AT2G42830 62.0 4.6e-59 224.9
Cco06g0023 . 1 245 MADS-box Gene Family AT2G45650 64.7 1.4e-82 303.1
Cco07g1680 . 1 246 MADS-box Gene Family AT2G45650 50.4 2.0e-54 209.5
Cco05g0921 . 1 172 MADS-box Gene Family AT2G45650 58.6 2.2e-48 189.5
Cco08g1206 . 1 195 MADS-box Gene Family AT2G45650 51.2 2.9e-45 179.1
Cco07g1681 . 1 169 MADS-box Gene Family AT2G45650 53.3 4.9e-40 161.8
Cco08g0096 . 1 164 MADS-box Gene Family AT2G45650 53.0 4.9e-40 161.8
Cco08g1207 . 1 177 MADS-box Gene Family AT2G45650 52.0 2.7e-38 156.0
Cco01g1749 . 63 188 MADS-box Gene Family AT1G69120 67.7 1.7e-40 162.9
Cco08g1207 . 63 179 MADS-box Gene Family AT1G69120 70.1 2.3e-37 152.5
Cco01g1749 . 63 241 MADS-box Gene Family AT5G60910 56.1 1.5e-43 172.9
Cco06g0210 . 1 242 MADS-box Gene Family AT1G24260 72.9 7.7e-88 320.5
Cco07g1680 . 1 245 MADS-box Gene Family AT1G24260 59.8 5.5e-70 261.2
Cco01g1750 . 1 252 MADS-box Gene Family AT1G24260 50.6 2.3e-55 212.6
Cco08g1206 . 1 156 MADS-box Gene Family AT1G24260 66.9 4.9e-50 194.9
Cco01g1749 . 1 157 MADS-box Gene Family AT1G24260 54.3 7.8e-40 161.0
Cco08g1207 . 1 159 MADS-box Gene Family AT1G24260 53.8 7.8e-40 161.0
Cco05g0921 . 1 171 MADS-box Gene Family AT1G24260 51.1 2.8e-37 152.5
Cco01g1749 . 1 245 MADS-box Gene Family AT1G26310 56.1 1.9e-68 256.1
Cco08g1207 . 1 178 MADS-box Gene Family AT1G26310 71.3 8.9e-66 247.3
Cco07g1681 . 1 235 MADS-box Gene Family AT1G26310 55.5 7.0e-63 237.7
Cco08g1206 . 1 180 MADS-box Gene Family AT1G26310 54.6 1.1e-44 177.2
Cco07g1680 . 1 173 MADS-box Gene Family AT1G26310 54.5 4.0e-42 168.7
Cco06g0023 . 1 158 MADS-box Gene Family AT1G26310 59.2 5.3e-42 168.3
Cco01g1750 . 1 174 MADS-box Gene Family AT1G26310 54.2 7.6e-41 164.5
Cco08g0096 . 1 223 MADS-box Gene Family AT4G09960 75.2 8.9e-89 323.6
Cco03g0720 . 20 197 MADS-box Gene Family AT4G09960 74.7 9.5e-67 250.4
Cco04g2193 . 46 221 MADS-box Gene Family AT4G09960 74.4 9.5e-67 250.4
Cco02g1961 . 60 216 MADS-box Gene Family AT4G09960 66.2 4.3e-51 198.4
Cco08g0104 . 1 201 MADS-box Gene Family AT1G71692 57.6 2.5e-58 222.2
Cco06g0023 . 1 241 MADS-box Gene Family AT3G61120 56.1 6.7e-63 237.7
Cco07g1680 . 1 173 MADS-box Gene Family AT3G61120 53.8 1.1e-41 167.2
Cco06g0210 . 1 170 MADS-box Gene Family AT3G61120 55.8 1.9e-41 166.4
Cco01g1749 . 1 168 MADS-box Gene Family AT3G61120 51.5 3.7e-37 152.1
Cco08g1206 . 1 173 MADS-box Gene Family AT3G61120 50.9 3.7e-37 152.1
Cco01g0335 . 1 208 MADS-box Gene Family AT4G11880 59.2 3.8e-57 218.4
Cco05g0237 . 9 222 MADS-box Gene Family AT4G11880 53.4 1.3e-49 193.4
Cco06g0024 . 1 218 MADS-box Gene Family AT4G11880 53.4 1.1e-48 190.3
Cco05g0928 . 1 189 MADS-box Gene Family AT4G11880 56.5 2.7e-42 169.1
Cco01g0562 . 1 210 MADS-box Gene Family AT4G11880 51.8 7.8e-42 167.5
Cco10g1206 . 1 249 MADS-box Gene Family AT5G13790 54.4 1.0e-56 217.2
Cco10g0961 . 29 255 MADS-box Gene Family AT2G22630 52.0 2.2e-55 212.6
Cco04g1582 . 1 160 MADS-box Gene Family AT2G22630 67.5 1.2e-53 206.8
Cco01g0335 . 1 210 MADS-box Gene Family AT4G22950 60.6 2.8e-60 228.8
Cco05g0237 . 9 224 MADS-box Gene Family AT4G22950 53.3 3.7e-52 201.8
Cco06g0024 . 1 218 MADS-box Gene Family AT4G22950 54.3 3.7e-52 201.8
Cco05g0928 . 1 189 MADS-box Gene Family AT4G22950 55.8 1.1e-43 173.7
Cco01g0562 . 1 210 MADS-box Gene Family AT4G22950 51.6 2.6e-42 169.1
Cco08g0096 . 1 164 MADS-box Gene Family AT4G22950 51.8 2.6e-37 152.5
Cco06g0024 . 1 162 MADS-box Gene Family AT2G45660 71.0 8.3e-54 206.8
Cco05g0237 . 9 168 MADS-box Gene Family AT2G45660 68.1 1.7e-51 199.1
Cco01g0335 . 1 158 MADS-box Gene Family AT2G45660 65.8 9.5e-50 193.4
Cco01g0562 . 1 158 MADS-box Gene Family AT2G45660 65.8 2.4e-45 178.7
Cco05g0928 . 1 157 MADS-box Gene Family AT2G45660 60.5 5.0e-43 171.0
Cco10g0961 . 29 256 MADS-box Gene Family AT4G37940 51.8 2.7e-55 212.2
Cco04g1582 . 1 155 MADS-box Gene Family AT4G37940 67.1 2.1e-52 202.6
Cco04g1600 . 116 338 MADS-box Gene Family AT2G22540 63.7 2.1e-69 259.2
Cco08g1324 . 1 225 MADS-box Gene Family AT2G22540 56.5 3.8e-58 221.9
Cco10g0939 . 25 179 MADS-box Gene Family AT2G22540 59.0 3.4e-43 172.2
Cco04g1600 . 116 342 MADS-box Gene Family AT4G24540 57.5 4.8e-60 228.0
Cco08g1324 . 1 225 MADS-box Gene Family AT4G24540 56.8 2.2e-57 219.2
Cco10g0939 . 25 199 MADS-box Gene Family AT4G24540 53.4 6.3e-44 174.5
Cco01g0562 . 1 145 MADS-box Gene Family AT5G62165 68.3 3.9e-48 188.0
Cco05g0928 . 1 146 MADS-box Gene Family AT5G62165 64.4 4.7e-46 181.0
Cco06g0024 . 1 154 MADS-box Gene Family AT5G62165 55.2 1.6e-41 166.0
Cco05g0237 . 9 152 MADS-box Gene Family AT5G62165 62.5 2.0e-41 165.6
Cco01g0335 . 1 153 MADS-box Gene Family AT5G62165 55.6 6.0e-41 164.1
Cco10g0961 . 29 263 MADS-box Gene Family AT2G14210 53.8 1.7e-55 213.0
Cco04g1582 . 1 142 MADS-box Gene Family AT2G14210 66.4 9.4e-46 180.6
Cco04g2225 . 84 200 MADS-box Gene Family AT1G29960 54.7 1.7e-38 155.6
Cco05g0928 . 1 145 MADS-box Gene Family AT5G51870 57.2 4.4e-41 164.9
Cco01g0562 . 1 144 MADS-box Gene Family AT5G51870 56.6 3.5e-38 155.2
Cco01g1749 . 1 239 MADS-box Gene Family AT3G30260 52.0 3.4e-54 208.8
Cco07g1681 . 1 239 MADS-box Gene Family AT3G30260 51.8 3.0e-50 195.7
Cco08g1207 . 1 178 MADS-box Gene Family AT3G30260 58.4 2.0e-46 183.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000220 5 8 4 7 6 6 7 6 5 4 5 5 5 4 4 4 7 9 6 6 5 4 5 5 6 7 5 6 9 3 168
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
59159 PF01486 K-box 3.90E-28 No_clan Cco TF