Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco04g2195 ATGGAGAAATCAAGTTTCTTTCTCCTTCTGCTGCTCCTCCTTCTCCTCCCTTTCATTCAACAAGCCTCTTCTTCCCACACTCACAAACAGGCTTACATTGTTTACTTTGGAGAACACCATGGAGATAAGAGTTGGGAAGAGATAGAAGCAATTCACCATTCATATTTGATGTTTGTTAAAGAGAGTGAAGAAGATGCAAAATCCTCTCTTCTGTACAATTACAAACACTCCATCAATGCCTTTGCTGCAATTCTTACTCCTCAACAAGCCTCCAAACTTTTAGAATTGGATGAAGTGGTGTCTGTGATAGAGAGTAAAAAGTATATGATGCACACAACAAGGTCATGGGAGTTTTCAGGGGTTGAAGAAGACAAACCCACCATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAGGATGTTGTGATTGGAATGCTCGACAGTGGTGTGTGGCCAAAGTCCAAAAGCTTTAGTGACAAAGGGATGGGACCCATTCCAAAATCATGGAAGGGAATCTGCCAAACAGGACCTGCCTTTCAATCTGCTCATTGCAATAGGAAGATAATTGGAGCTCGATATTACCTAAAGGGATACGAGCATCACTTTGGCCGTTTAAATGAAACGGCGGACTACCGATCACCCTGCGACAAGGACGGCCACGGATCTCACACAGCCTCCATCGCCGGCGGCCGGAGGGTATACAATGTGTCGGGCTTTGGCGGCGTCGCTTGGGGCACGGCCTCTGGCGGCGCCCCATGGGCCCGGCTTGCAATTTACAAAGTTTGTTGGGCCATTCCCAACCAAATGAAAGCTCTGGGAAACGTTTGTTTCGACACCGACATGTTGGCTGCCATGGACGACGCCATTGCCGACGGCGTCGATGTTCTCAGCTTGTCCATCGGAAAATCGGAACCGTACAATTACACGGATGACGGAATCGCCATCGGAGCTCTGCACGCCGTTAAAAAAGACATCGTTGTGTCTTGTAGCGCTGGGAATTATGGGCCTACGCCGTCGGCGTTGTCTAATGTTGCGCCGTGGATCATAACCGTTGGAGCTAGCACTGTGGATCGGGAATTTTATTCTCCGGTCATTCTCGGTAATGGATTGAAGATTAAGGGATTGTCGGTGGCTCCTTCGAAGTTGAAGAGGAAGAAGATGTATCCATTGGTGTATGCTGGAGATATAATGAAGCCTCATGTACCTCGTAACCAATCTGGGCTATGTGTGGCAGGCTCGCTTTCACACGAGAAAGCCAAAGGAAAGATAGTGCTGTGCTTTAGAGGAGAAGGAATCAGCCGATACGCCGGCAGCCTAGAAGTTAAAAGGTCAGGCGGCGCCGGAATGATACTTGGAAACGTGCCGGCGGTAGGACGGAGGCTGCACGCCGATCCCCATTTCGTTCCGGCCACCGCCGTCTCTTACGAAGATGCAAATATGATCCTTAAATATATAAAATCTCGCGCAAATCCAACCGCAACTATTGTTCCACCTGTCACTATCTACGGCTCCAGGCCGGCGCCAGCCATGGCCAACTTCTCAAGTAGAGGTCCAAACCCCGTCGACCCTCATTTTCTTAAGCCGGACATAACAGCTCCGGGGGTGGACATACTAGCAGCATGGTCCGAAGAAGATTCCCCAACTAAACTTCCAAAATCCTTGGACTCTCGTATTGTCCAATACAATCTCTACTCCGGCACCTCCATGTCCTGTCCCCACGTCTCCGCCGCCGCCGCCCTCCTCCGCGCCATCCACCCTACATGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCGCCACCACCAACAACAAATCCGGCCACCCCATCACCGACGACGCCACCCCCGACAACTCCCCCGCCAACCCTTTCTCCTTTGGGTCCGGCCACTTCCGCCCCTCCAAGGCGGCGGACCCCGGCCTCGTCTACGACACCAATTACACTGACTATCTCCACTACCTGTGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCACGTGCCCTCCACGTGCCCTCCCACCCCACGACCTCAATTACCCTTCCATTGCCGTCCCCCAACTCAGAGGAACCGTGAGGATCAAAAGGACCGTCACCAACGTGGGCGGCGGAGGTAAAAGTGTGTACTTCTTTTACAGCGAGGCGCCGCCGGGTGTGGCTGTGAGTGCTTCTCCTAATATACTGTATTTCAATAGAGTTGGGGAGAGGAAAAGATTTACAATTTCAGTGAGTGGGAAAGTAAAAAATAGTAATAATAATAATAATGGGTACTCTTTTGGTTGGTTTGCTTGGAGTGATGGGATTCACTATGTTAGAAGCCCAATTGCAGTTTCTTCAACTTAA 2346 50.47 MEKSSFFLLLLLLLLLPFIQQASSSHTHKQAYIVYFGEHHGDKSWEEIEAIHHSYLMFVKESEEDAKSSLLYNYKHSINAFAAILTPQQASKLLELDEVVSVIESKKYMMHTTRSWEFSGVEEDKPTINDLVSRANYGKDVVIGMLDSGVWPKSKSFSDKGMGPIPKSWKGICQTGPAFQSAHCNRKIIGARYYLKGYEHHFGRLNETADYRSPCDKDGHGSHTASIAGGRRVYNVSGFGGVAWGTASGGAPWARLAIYKVCWAIPNQMKALGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSEPYNYTDDGIAIGALHAVKKDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLKRKKMYPLVYAGDIMKPHVPRNQSGLCVAGSLSHEKAKGKIVLCFRGEGISRYAGSLEVKRSGGAGMILGNVPAVGRRLHADPHFVPATAVSYEDANMILKYIKSRANPTATIVPPVTIYGSRPAPAMANFSSRGPNPVDPHFLKPDITAPGVDILAAWSEEDSPTKLPKSLDSRIVQYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTNNKSGHPITDDATPDNSPANPFSFGSGHFRPSKAADPGLVYDTNYTDYLHYLCGLKMNSIDPSFTCPPRALPPHDLNYPSIAVPQLRGTVRIKRTVTNVGGGGKSVYFFYSEAPPGVAVSASPNILYFNRVGERKRFTISVSGKVKNSNNNNNGYSFGWFAWSDGIHYVRSPIAVSST 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35587914 35595905 + CcPI632755_04g021950.1 Cco04g2195 177420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco04g2195 781 Pfam Peptidase inhibitor I9 32 111 IPR010259 -
Cco04g2195 781 ProSiteProfiles Serine proteases, subtilase domain profile. 115 638 - -
Cco04g2195 781 SUPERFAMILY Subtilisin-like 111 642 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco04g2195 781 FunFam Subtilisin-like protease SBT1.5 140 383 - -
Cco04g2195 781 Pfam PA domain 388 480 IPR003137 -
Cco04g2195 781 MobiDBLite consensus disorder prediction 603 630 - -
Cco04g2195 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cco04g2195 781 Pfam Fibronectin type-III domain 678 778 IPR041469 -
Cco04g2195 781 Gene3D - 357 502 - -
Cco04g2195 781 Gene3D - 655 781 - -
Cco04g2195 781 Pfam Subtilase family 138 612 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco04g2195 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 776 IPR045051 -
Cco04g2195 781 MobiDBLite consensus disorder prediction 603 626 - -
Cco04g2195 781 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cco04g2195 781 PRINTS Subtilisin serine protease family (S8) signature 565 581 IPR015500 -
Cco04g2195 781 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cco04g2195 781 CDD Peptidases_S8_3 108 602 IPR034197 -
Cco04g2195 781 CDD PA_subtilisin_like 364 495 - -
Cco04g2195 781 Gene3D Peptidase S8/S53 domain 140 651 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco04g2195 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 566 576 IPR023828 -
Cco04g2195 781 FunFam subtilisin-like protease SBT1.5 357 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g2195 Cco-Chr4:35587914 Cco10g0393 Cco-Chr10:4601647 3.60E-166 dispersed
Cco04g2195 Cco-Chr4:35587914 Cco09g0103 Cco-Chr9:902807 9.10E-162 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco04g2195 - - - 0.0