Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco04g2326 | ATGGTCGGAGGCTTTGAAGTGGGAGCGGTCCCCTACAACCCGGACGGTTGGGGTCCCCCGGACTCTACTGCCACTCTCGTCGCTTCCTCTAACCTGCCTCTCAATGTCCCCTTTGCCCCATTCTCTCGCTCCGATAAGCTTGGCCGGATTGCCGATTGGACCCGAACCATGAATAACCCTGGCCGCCCAAAGACTGCTTCTGATTCCGTCTTCGATTTCACGAATGACGATTCCTTCCCGGCCAATGCCGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCGCGCCCCAAATTTGGCCCTAAATGGCGTTTCAACCAACAAAGGACGCAGCTACCTCAGCGCCGTGACGAAGAAGTTGAAGCTCGAAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGACCGCCTTTACAACCTCAACAGGTCTAATGTCAATGCCCCCCGTCGTGAAGCTGCTGTTTTCAAATCCTCTGTCGAAATTCAACCCGAATGGAACATGCTTGATCAGATTCCCTTCTCCACTTTCTCCAAGCTTTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTATGATCGAGCATACGACCGAATCACTCCCAAGAACGAGCGCCGCCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACTGACGATCCTGTCATTCGTCGTCTAGCAAATGAGGACAAAGCGACGGTTTTTGCTACCGATGCCATCCTTTCTACCCTTATGTGTGCAACTAGATCGGTTTACTCCTGGGATATTGTGGTTCAGCGTGTTGGGAATAAACTTTTCTTCGATAAGAGGGATGGGTCGCAACTTGATTTGCTTGCCGTCCATGAGACCTCTCAGGAACCTTTACCTGAGGCGAAGGACGATATCAATTCCGCTTACTCACTCAGTGTTGAAGCTGCTTACATTAACCAGAACTTCTCGCAGCAAGTTTTAGTTAGGGATGGAAATAAGGTGGCCTTTGACGAGCCAAACCCATTTGCAAATGAGGGTGAGGAGGTTGCTTCTGTTGCTTATAGGTATAGGAGGTGGAAACTCGATGATGACATGTATCTTGTAGCGAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAAAGATCATTCTTGACTTTGAACGCTCTTAATGAATTTGATCCCAAGTATTCTGGTGTTGATTGGAGGCAGAAGTTGGAGACACAAAGGGGTGCTGTTTTGGCCACTGAGTTGAAGAACAATGCTAATAAATTGGCAAAATGGACAGCTCAAGCCCTGTTGGCTAGCGCAGACATGATGAAGTTGGGATACGTCTCTAGGGTTCATCCTCGCGATCACTTTAACCATGTCATCTTAGCTGTGGTTGGATACAAACCTAAGGATTTTGCAGGTCAAATTAACTTAAATACGTCTAACATGTGGGGTATTGTTAAATCTATCGTGGATTTGTGCATGAAATTGAACGAAGGTAAGTACGTTTTGGTCAAGGACCCATCGAAACCACAGGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTCGCTGAGGAGGATCAAGTGCAACCACCAGCCGAAGATGAAAATGGTGTCACTCCTAATGCGGGGACGGATGATGCAGAAGAGAAGGTTGATGCTGCTCAAGCTTAA | 1701 | 48.62 | MVGGFEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAGQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPAEDENGVTPNAGTDDAEEKVDAAQA | 566 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 36722887 | 36724587 | + | CcPI632755_04g023260.1 | Cco04g2326 | 177551 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco04g2326 | 566 | MobiDBLite | consensus disorder prediction | 114 | 134 | - | - | |
Cco04g2326 | 566 | MobiDBLite | consensus disorder prediction | 527 | 566 | - | - | |
Cco04g2326 | 566 | PIRSF | Transl_init_eIF3d | 1 | 547 | IPR007783 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
Cco04g2326 | 566 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 | 4 | 541 | IPR007783 | GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005737(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER) | |
Cco04g2326 | 566 | MobiDBLite | consensus disorder prediction | 527 | 541 | - | - | |
Cco04g2326 | 566 | Hamap | Eukaryotic translation initiation factor 3 subunit D [EIF3D]. | 3 | 529 | IPR007783 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
Cco04g2326 | 566 | Pfam | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | 5 | 517 | IPR007783 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
Cco04g2326 | 566 | Coils | Coil | 118 | 138 | - | - | |
Cco04g2326 | 566 | MobiDBLite | consensus disorder prediction | 88 | 134 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco04g2326 | K03251 | - | csv:101208923 | 1109.36 |