Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco04g2337 | ATGGATATTATTTACTGTGCACGTCTACTATGTGTTGTTGTCTTTGGGATGTTTCTATGCGCATCTTGTCTTGACGAATTCGGTGATTCAACAGCTGTGTACATTGTAACTCTCAAGGAACCTCCTTCCACTACTCATTACTATGGTCAGCTTAGACAAAATACCACTTCTTTTAGGCTTAATACTTCTGGTGGATTAAGCATCCACCAACCAAGAAACATATCGAGAAAGCATCGAAGATATAGATCTTACATAGCCCGAGTTCATGATTCATTGTTGAAGAAGGTCTTGAAGGGGGAAAAATATCTGAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAGTAAACTTTCAAAGAGGATAGAGGTGGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCACACTCCACAGTTCTTGGGCCTACCGCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAGTCTGCTGGAGCTGGGATTGTGATAGGGTTCATTGACACTGGCATTGATCCTTCGCACCCCAGCTTTGCTGATGATTTGACTGATAATCCGTTTCCCATTCCGGCTCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGATCTTGCAATCGGAAGCTTGTGGGAGCACGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCATCGCCATTTGATGGTGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTCATAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGTTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAGGATGGAGTGGATATAATAAGTTTATCAATCACACCGAATCGGCGTCCCCCTGGTATTGCAACATTTTTTAATCCCATAGATATGGCACTGCTCTCTGCTGTAAAGGCTGGTATATTTGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCTTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCTTCTCACGATAGAAGCTATGCTAACTCTATACACCTTGGCAATAATGTCACCATTCCGGGGGTCGGTCTTGCACCTGGAACCTATAATGACACAAAGTACAAACTAGTTGCTGCAATGCATGCACTGAACAATGACACAAACGTGTCAGAGGACATGTATGTGGGCGAATGCCAAGACTCCAGTAACTTTGATCAGGATCTGGTCCAGGGGAACCTTCTAATATGCAGCTACTCAATCAGATTTGTGCTAGGGCTTTCAACGGTTAAACAGGCTTTACAGACGGCGAAAAACTTGAGTGCCGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTAGGCTCAACCCAATTCCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCTTTGGAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCCAGCATATGTGGAGGATTGAAGGCAAATTATAGCTCTTCTGCCCCACAAATTATGTACTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCTAACTTGGTAGCTCCTGGAAATTCCATATGGGCTGCTTGGAGCTCTGTTGCCACTGACTCTATTGAATTTCTCGGTGAAAACTTCGCAATGATGTCAGGAACGAGCATGGCTGCTCCTCATATTGCAGGCCTAGCCTCACTCATAAAGCAGAAGTATCCTAATCTTAGTCCTTCAGCCATTGCATCTGCACTATCGACAACAGCTTCTCTTTACAACAAGACTGGTGGACCGATCATGGCACAGCGTGCTTATGCTAACCCTGAACAGAACCAGTCTCCAGCTACGCCTTTCGATATGGGAAGTGGTTTTGTGAATGCAACAGCAGCTCTCAACCCAGGGTTGATATTTGATTCTAGTTACGATGATTATATGTCTTTTCTTTGTGGTATCAACGGATCATCTCCTGTGGTCTTCAACTACACAGGCCAGAACTGTGGGCTATACAATTCTAGCATTACTGGAGCTGATTTGAACTTGCCCTCTGTGACGATAGCAAAACTTAACCAGTCGAGAGTAGTGCAACGAACCGTGACCAACATTGCTGGACCTGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCAACTCGATTTACAATCGGCAGTGGCGAGAAACAGGAGCTAACCATATTCTTCAACTCCACGATGAACAGCTCAGTTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAGTGCAGGCCATATAATCAACATTCCTCTTTCGGTCATTTTGAAGATCTCATATAACAATACTACTAATTGA | 2532 | 43.68 | MDIIYCARLLCVVVFGMFLCASCLDEFGDSTAVYIVTLKEPPSTTHYYGQLRQNTTSFRLNTSGGLSIHQPRNISRKHRRYRSYIARVHDSLLKKVLKGEKYLKLYSYHFLINGFAVLVTEEQASKLSKRIEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFESAGAGIVIGFIDTGIDPSHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSIHLGNNVTIPGVGLAPGTYNDTKYKLVAAMHALNNDTNVSEDMYVGECQDSSNFDQDLVQGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKKISKFGAVASICGGLKANYSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNSIWAAWSSVATDSIEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPNLSPSAIASALSTTASLYNKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSITGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEFYSVGWSAPYGISLKVSPTRFTIGSGEKQELTIFFNSTMNSSVASFGRIGLFGSAGHIINIPLSVILKISYNNTTN | 843 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 36816173 | 36822296 | + | CcPI632755_04g023370.1 | Cco04g2337 | 177562 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco04g2337 | 843 | Pfam | Subtilase family | 170 | 665 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco04g2337 | 843 | SUPERFAMILY | Subtilisin-like | 145 | 697 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco04g2337 | 843 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 22 | 143 | IPR037045 | - | |
Cco04g2337 | 843 | Gene3D | Peptidase S8/S53 domain | 172 | 706 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco04g2337 | 843 | Pfam | Fibronectin type-III domain | 739 | 832 | IPR041469 | - | |
Cco04g2337 | 843 | Pfam | Peptidase inhibitor I9 | 33 | 144 | IPR010259 | - | |
Cco04g2337 | 843 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 616 | 626 | IPR023828 | - | |
Cco04g2337 | 843 | PRINTS | Subtilisin serine protease family (S8) signature | 615 | 631 | IPR015500 | - | |
Cco04g2337 | 843 | PRINTS | Subtilisin serine protease family (S8) signature | 170 | 189 | IPR015500 | - | |
Cco04g2337 | 843 | PRINTS | Subtilisin serine protease family (S8) signature | 250 | 263 | IPR015500 | - | |
Cco04g2337 | 843 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 93 | 797 | IPR045051 | - | |
Cco04g2337 | 843 | Gene3D | - | 385 | 553 | - | - | |
Cco04g2337 | 843 | Gene3D | - | 710 | 834 | - | - | |
Cco04g2337 | 843 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 150 | 693 | - | - | |
Cco04g2337 | 843 | CDD | PA_subtilisin_like | 391 | 526 | - | - | |
Cco04g2337 | 843 | CDD | Peptidases_S8_3 | 145 | 652 | IPR034197 | - | |
Cco04g2337 | 843 | FunFam | Subtilisin-like protease SBT1.5 | 172 | 396 | - | - | |
Cco04g2337 | 843 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 175 | 186 | IPR023827 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g2337 | Cco-Chr4:36816173 | Cco11g1214 | Cco-Chr11:24120027 | 2.20E-190 | dispersed | |
Cco04g2337 | Cco-Chr4:36816173 | Cco05g0916 | Cco-Chr5:7916287 | 3.90E-86 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco04g2337 | - | - | - | 0.0 |