Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g0179 ATGGCATCAAGTTTGGGAGGGGCATCGATGTCACAAACAGATGATTTCGAGATGTTCACTCCAACGACTGATGTTGAGCCTCTAAAGAGGGCCTGGCGTAATGAGAAGGCTGCTCCTGAGATTCTACCCTTTGAGGGATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAGTCAATGGAAGAGACTATAGAGGAATATTCAAGAAGTGGTATCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTGTTGAGATCGTATGTTAGGAGTCGTTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCCAAAGAAGAGATAACGTTTACTGATAGGTGTCGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACATTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACATATACAGCTTGAGGATGAGGAAGAGAGGGCATCCAGTAGATTAGAGGAACCTTTTGAGATGGAGGCCAATCTTTCGACATGGGTGATGGAGACTATTTCATTGGCTGCTTGGATGCTAATTTCAACATTGGATGAGCTCATAAATGAAAGGAATGATAGAGCATTGAAGGCATTGGCAAAGGCTGGTGAGCCATTTCAATCTGATATTTCATGA 765 40.65 MASSLGGASMSQTDDFEMFTPTTDVEPLKRAWRNEKAAPEILPFEGSLVGRIKEQIQSMEETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYVRSRLQKIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRLEEPFEMEANLSTWVMETISLAAWMLISTLDELINERNDRALKALAKAGEPFQSDIS 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1406241 1409542 - CcPI632755_05g001790.1 Cco05g0179 177807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g0179 254 Gene3D - 11 214 - -
Cco05g0179 254 CDD GINS_A_Sld5 24 142 IPR038749 -
Cco05g0179 254 Pfam GINS complex protein helical bundle domain 75 138 IPR021151 -
Cco05g0179 254 PANTHER SLD5 PROTEIN 11 213 IPR008591 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro)
Cco05g0179 254 FunFam DNA replication complex GINS protein SLD5 9 210 - -
Cco05g0179 254 SUPERFAMILY GINS helical bundle-like 20 154 IPR036224 -
Cco05g0179 254 Coils Coil 49 69 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g0179 K10735 - csv:101210888 393.275