Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g0314 ATGGAGGTGAGTTGGGCTGTGGCGGCGGTAGCTGCAGCAGCGGCAGTGTTTGCGGCGGTGAAATGGGCGGCGAAGAGTTTGAATGAGTGGATATATGAGGCGAAATTAGGTGATCGGCGGATGGCTCTGCCGCCGGGGGATTTGGGATGGCCTATAATTGGAAATATGTTGGGTTTTCTTAGAGCTTTCAAGTCCAAGAACCCTGAAACCTTCATTGATAGCTATGTTTCCAGGTTTGGGAAAATAGGAGTGTACAAGGTTCATTTGTTTGGAAACCCTAGCGTGGTCGTGACGACGCCGGAGACATGCCGGAAAGTTCTTACAGACGACGAGGCCTTTCAGCCCGGTTGGCCACGCGCGGCCGTAGAGCTCATCGGAAAGAAGTCCTTCATCGAAATGCCGGTCGAGGAACACAAGCGCCTTCGCCGCTTAACCTCTGCTCCGGTGAACGGTTTCGAGGCTTTGAGCAATTACATTCCTTACATCGAAGAGAATGTATTGAAATCGTTGGATAAATGGTCCAATATGGGGCCAATCGAATTCTTAACTCAACTTCGTAAGCTCACATTCACCATTATCATGTACATTTTCCTTAGCGCGGAGAGCGAATCGGTAATGGAGGCGTTAGAGAAGGAGTACACTCGGCTGAACTACGGTGTTCGAGCCCTGAGAATTAACATACCTGGATTTGCTTACCACAGAGCACTCAAGGCTCGGAAGAATCTTGTGGCTGCGTTGCAAGCAATTGTTACTGATCGAAGAAAACGAAGATTGGACAAATGGGCGCCGATGAGGAAGGACATGATGGACGCTCTGATTGATGTTGAAGATGAAAATGGCAGAAAATTGACTGATGAGGAGATCATTGATATCTTAGTGATGTACTTGAATGCTGGTCATGAATCTTCAGGCCATACCATGATGTGGGCAACTATTTTGTTGAATCAACACCCAAAAGTTCTCAAGAAAGCTAAGGCAGAGCAGGAGGAGATTGTGAGGAGGAGACCTCCAGGTCAAAAGGGATTGACTTTGAAAGAATGCAGGGAAATGGAATATCTCTCAAAAGTGGTCGACGAGACTCTTCGCTATGTATCATTCTCCCTTGTTGTCTTCAGAGAAGCACAGATGGATGTCAATCTTAATGGCTATCTAATTCCCAAGGGTTGGAAAGTCCTGGCTTGGTTCAGAAGCATTCACTATGACAGTGAAGTTTACCCAGACCCAAAGAAATTTGATCCTTCAAGATGGGATGGATTTATCCCAAAAGCAGGCGAGTTTCTTCCATTTGGAGCAGGAAGCAGGCTGTGCCCAGGAAATGATCTAGCCAAATTGGAGATCTGCATTTTCATTCACTATTTTCTACTCAATTACAAGCTTGAATGGCTGACCCCTGATTGTCCAATCTTGTATCTGCCACATTCAAGGCCAAAGGACAATTGCTTGGCTAAAATCAGTAAGAATTCCAGCACTGTTGTGTAA 1479 46.32 MEVSWAVAAVAAAAAVFAAVKWAAKSLNEWIYEAKLGDRRMALPPGDLGWPIIGNMLGFLRAFKSKNPETFIDSYVSRFGKIGVYKVHLFGNPSVVVTTPETCRKVLTDDEAFQPGWPRAAVELIGKKSFIEMPVEEHKRLRRLTSAPVNGFEALSNYIPYIEENVLKSLDKWSNMGPIEFLTQLRKLTFTIIMYIFLSAESESVMEALEKEYTRLNYGVRALRINIPGFAYHRALKARKNLVAALQAIVTDRRKRRLDKWAPMRKDMMDALIDVEDENGRKLTDEEIIDILVMYLNAGHESSGHTMMWATILLNQHPKVLKKAKAEQEEIVRRRPPGQKGLTLKECREMEYLSKVVDETLRYVSFSLVVFREAQMDVNLNGYLIPKGWKVLAWFRSIHYDSEVYPDPKKFDPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEICIFIHYFLLNYKLEWLTPDCPILYLPHSRPKDNCLAKISKNSSTVV 492
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 2493845 2500677 - CcPI632755_05g003140.1 Cco05g0314 177942
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco05g0314 492 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 FunFam Ent-kaurenoic acid oxidase 34 487 - -
Cco05g0314 492 PANTHER CYTOCHROME P450 26 42 464 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
Cco05g0314 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco05g0314 492 Pfam Cytochrome P450 44 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 Gene3D Cytochrome P450 34 487 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g0314 492 CDD CYP90-like 76 486 - -
Cco05g0314 492 SUPERFAMILY Cytochrome P450 39 484 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g0314 Cco-Chr5:2493845 Cco10g0190 Cco-Chr10:1881134 3.50E-127 dispersed
Cco09g0918 Cco-Chr9:8622392 Cco05g0314 Cco-Chr5:2493845 4.70E-90 transposed
Cco10g0189 Cco-Chr10:1849342 Cco05g0314 Cco-Chr5:2493845 2.30E-132 wgd
Cco05g0314 Cco-Chr5:2493845 Cco06g0072 Cco-Chr6:669503 5.80E-199 wgd
Cco05g0314 Cco-Chr5:2493845 Cco09g1260 Cco-Chr9:13411578 1.70E-129 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g0314 K04123 - csv:101221667 944.495