Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g0339 ATGTATGAGGCTGAGATCCACAATGGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGAGCCAGCGGAACCCTTCCACTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCTTCTCTCTCCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCGCGCTCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCCGCAGCTGCTTCGACCGACGATGCCTTTGTCTCCGCCTGGAAGAAGGTGATCCCCAATATTGACCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCTTATGCCTCCGAACTCTCGGCCAAAGAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCCGAGTTAAAGCCAGGGGTTCTATCAGTACACGATGGGAGCGACATCAAAAAATACTTCGTCAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCTAGCCAAGTACAGAAGGGTCTTGCTGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCTGAAGCCCAAATTGGAGTTGACGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAG 753 51.0 MYEAEIHNGFGKSSIFSASKQSQRNPSTSPSPSSSLSDLARAERPPSLSAMFRRASSLLARSFLSARTRSFSTDLPAAASTDDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2763285 2765400 + CcPI632755_05g003390.1 Cco05g0339 177967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g0339 250 Coils Coil 215 235 - -
Cco05g0339 250 Hamap ATP synthase epsilon chain [atpC]. 118 238 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Cco05g0339 250 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 76 250 IPR001469 GO:0000275(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)|GO:0046933(PANTHER)
Cco05g0339 250 FunFam ATP synthase subunit delta 207 249 - -
Cco05g0339 250 Gene3D - 108 206 IPR036771 -
Cco05g0339 250 CDD F1-ATPase_delta 120 243 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Cco05g0339 250 MobiDBLite consensus disorder prediction 13 42 - -
Cco05g0339 250 Gene3D - 207 249 - -
Cco05g0339 250 FunFam ATP synthase delta 109 206 - -
Cco05g0339 250 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 120 191 IPR020546 GO:0015986(InterPro)
Cco05g0339 250 MobiDBLite consensus disorder prediction 13 40 - -
Cco05g0339 250 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 120 201 IPR036771 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g0339 K02134 - csv:101206104 350.517