Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g0339 | ATGTATGAGGCTGAGATCCACAATGGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGAGCCAGCGGAACCCTTCCACTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCTTCTCTCTCCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCGCGCTCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCCGCAGCTGCTTCGACCGACGATGCCTTTGTCTCCGCCTGGAAGAAGGTGATCCCCAATATTGACCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCTTATGCCTCCGAACTCTCGGCCAAAGAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCCGAGTTAAAGCCAGGGGTTCTATCAGTACACGATGGGAGCGACATCAAAAAATACTTCGTCAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCTAGCCAAGTACAGAAGGGTCTTGCTGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCTGAAGCCCAAATTGGAGTTGACGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAG | 753 | 51.0 | MYEAEIHNGFGKSSIFSASKQSQRNPSTSPSPSSSLSDLARAERPPSLSAMFRRASSLLARSFLSARTRSFSTDLPAAASTDDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2763285 | 2765400 | + | CcPI632755_05g003390.1 | Cco05g0339 | 177967 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g0339 | 250 | Coils | Coil | 215 | 235 | - | - | |
Cco05g0339 | 250 | Hamap | ATP synthase epsilon chain [atpC]. | 118 | 238 | IPR001469 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cco05g0339 | 250 | PANTHER | ATP SYNTHASE DELTA/EPSILON CHAIN | 76 | 250 | IPR001469 | GO:0000275(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)|GO:0046933(PANTHER) | |
Cco05g0339 | 250 | FunFam | ATP synthase subunit delta | 207 | 249 | - | - | |
Cco05g0339 | 250 | Gene3D | - | 108 | 206 | IPR036771 | - | |
Cco05g0339 | 250 | CDD | F1-ATPase_delta | 120 | 243 | IPR001469 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
Cco05g0339 | 250 | MobiDBLite | consensus disorder prediction | 13 | 42 | - | - | |
Cco05g0339 | 250 | Gene3D | - | 207 | 249 | - | - | |
Cco05g0339 | 250 | FunFam | ATP synthase delta | 109 | 206 | - | - | |
Cco05g0339 | 250 | Pfam | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | 120 | 191 | IPR020546 | GO:0015986(InterPro) | |
Cco05g0339 | 250 | MobiDBLite | consensus disorder prediction | 13 | 40 | - | - | |
Cco05g0339 | 250 | SUPERFAMILY | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 120 | 201 | IPR036771 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g0339 | K02134 | - | csv:101206104 | 350.517 |