Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g0497 | ATGGGAAGAGAACAACTACAAGTGTTGAACGCACTTGATGTGGCGAAAACACAATGGTACCATTTCACAGCCATTGTGATAGCTGGAATGGGCTTTTTCACAGACGCATATGATCTATTTTGTGTATCTCTTGTTACCAAACTATTGGGTCGAATTTACTATCACAAAGAAGGCTCAAACAAGCCTGGTGAATTGCCTTCAAACATAGCCGCCGCTATAAACGGCGTCGCTTTCTGTGGAACCCTCTCTGGCCAGCTCTTCTTTGGGTGGCTTGGTGACAAGATGGGCCGGAAACGAGTCTATGGAATGACCCTTATGCTTATGGTCATTTGCTCTGTAGCTTCCGGACTATCTTTCAGCAGCACCCCAACATCTGTGGTGGCCACTCTCTGTTTTTTCCGATTCTGGCTGGGATTTGGCATCGGCGGCGATTACCCACTTTCCGCCACCATCATGTCGGAATATGCCAATAAAAGGACACGAGGGGCGTTCATTGCCGCTGTCTTTGCAATGCAAGGGTTTGGGATTTTGGCCGGTGGGGTGGTGGCAATAATTGTCTCCGCCGCATTTGACGCTAAATTCCCATCTCCATCGTATAAGGACAATCCCACCGCCTCAACCGTCCCACAAGCTGATTATGTGTGGCGAATTATTGTGATTTTTGGTGCCTTTCCGGCTCTACTCACTTATTACTGGCGAATGAAAATGCCTGAAACTGCTCGTTACACCGCCTTGGTTGCTAAAAATGCCAAACAAGCAGCTGCTGATATGTCTAAAGTTCTACAAGTTGAATTGGAATCAGAGCAGGAAAAAATCGACGAGGGAAAATCGAAGAATAATGACTTTGGGTTGTTCTCAATGAGTTTTGTTCGTCGGCATGGGCTTCACTTGCTGGGGACTACTACTACATGGTTCTTGTTAGACATTGCATTTTACAGTCAGAATCTCTTCCAGAAGGACATTTTCACTGCCATTGGTTGGCTTCCTCCACCAGAGACGATGAACGCCATTGAAGAAGTTTTCAGAATCGCCAAAGCTCAAACCCTCATTGCATTGTGCAGTACAGTACCCGGGTATTGGTTCACTGTGGCGCTCATTGACGTAATGGGACGGTTTGCAATTCAATTGATGGGGTTTTTCTTCATGACGGTATTTATGTTCGCATTGGCCATTCCATACAAGCATTGGACTTTAGAAGCCAATAGAATTGGGTTTGTTGTGATGTACTCGTTGACGTTCTTCTTCGCGAATTTTGGGCCAAATGCCACCACTTTCGTGGTTCCAGCAGAGATATTTCCAGCCAGACTTCGATCGACGTGCCATGGAATATCGGCTGCTTCTGGAAAAGCAGGGGCAATTGTGGGGGCGTTCGGGTTTCAGTATGCTGAAAAGGGGATTGGAGTGAAGAAGACATTGATAATTCTTGGTGTTGTGAATGCTCTTGGTATGTTCTTCACTCTGTTGGTACCGGAATCGAAGGGGAAGTCTTTGGAAGAAATGTCGGGTGAAGCTGGAGATGAGGCAGAGAGCAAAGCAGACTCAAGGACTCAATCTGATCACAGAACTATGCCTGTTTGA | 1578 | 46.39 | MGREQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHKEGSNKPGELPSNIAAAINGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKFPSPSYKDNPTASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQEKIDEGKSKNNDFGLFSMSFVRRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPPPETMNAIEEVFRIAKAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGIGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEAGDEAESKADSRTQSDHRTMPV | 525 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3970309 | 3971886 | - | CcPI632755_05g004970.1 | Cco05g0497 | 178125 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g0497 | 525 | CDD | MFS_PhT | 25 | 493 | - | - | |
Cco05g0497 | 525 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 9 | 499 | - | - | |
Cco05g0497 | 525 | FunFam | Inorganic phosphate transporter 1-6 | 20 | 515 | - | - | |
Cco05g0497 | 525 | MobiDBLite | consensus disorder prediction | 498 | 525 | - | - | |
Cco05g0497 | 525 | NCBIfam | phosphate:H+ symporter | 11 | 503 | IPR004738 | GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro) | |
Cco05g0497 | 525 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 24 | 494 | IPR020846 | GO:0022857(InterPro) | |
Cco05g0497 | 525 | Gene3D | MFS general substrate transporter like domains | 273 | 518 | IPR036259 | - | |
Cco05g0497 | 525 | Gene3D | MFS general substrate transporter like domains | 20 | 266 | IPR036259 | - | |
Cco05g0497 | 525 | Pfam | Sugar (and other) transporter | 26 | 501 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cco05g0497 | 525 | SUPERFAMILY | MFS general substrate transporter | 12 | 501 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco05g0497 | Cco-Chr5:3970309 | Cco07g0119 | Cco-Chr7:1283427 | 1.00E-233 | dispersed | |
Cco05g0497 | Cco-Chr5:3970309 | Cco05g0498 | Cco-Chr5:3986016 | 2.60E-229 | tandem | |
Cco05g1032 | Cco-Chr5:9084874 | Cco05g0497 | Cco-Chr5:3970309 | 2.30E-187 | transposed | |
Cco05g0497 | Cco-Chr5:3970309 | Cco06g0725 | Cco-Chr6:8259503 | 2.10E-231 | wgd | |
Cco05g0497 | Cco-Chr5:3970309 | Cco07g0102 | Cco-Chr7:1049884 | 1.00E-233 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g0497 | K08176 | - | csv:101209582 | 928.317 |