Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g0497 ATGGGAAGAGAACAACTACAAGTGTTGAACGCACTTGATGTGGCGAAAACACAATGGTACCATTTCACAGCCATTGTGATAGCTGGAATGGGCTTTTTCACAGACGCATATGATCTATTTTGTGTATCTCTTGTTACCAAACTATTGGGTCGAATTTACTATCACAAAGAAGGCTCAAACAAGCCTGGTGAATTGCCTTCAAACATAGCCGCCGCTATAAACGGCGTCGCTTTCTGTGGAACCCTCTCTGGCCAGCTCTTCTTTGGGTGGCTTGGTGACAAGATGGGCCGGAAACGAGTCTATGGAATGACCCTTATGCTTATGGTCATTTGCTCTGTAGCTTCCGGACTATCTTTCAGCAGCACCCCAACATCTGTGGTGGCCACTCTCTGTTTTTTCCGATTCTGGCTGGGATTTGGCATCGGCGGCGATTACCCACTTTCCGCCACCATCATGTCGGAATATGCCAATAAAAGGACACGAGGGGCGTTCATTGCCGCTGTCTTTGCAATGCAAGGGTTTGGGATTTTGGCCGGTGGGGTGGTGGCAATAATTGTCTCCGCCGCATTTGACGCTAAATTCCCATCTCCATCGTATAAGGACAATCCCACCGCCTCAACCGTCCCACAAGCTGATTATGTGTGGCGAATTATTGTGATTTTTGGTGCCTTTCCGGCTCTACTCACTTATTACTGGCGAATGAAAATGCCTGAAACTGCTCGTTACACCGCCTTGGTTGCTAAAAATGCCAAACAAGCAGCTGCTGATATGTCTAAAGTTCTACAAGTTGAATTGGAATCAGAGCAGGAAAAAATCGACGAGGGAAAATCGAAGAATAATGACTTTGGGTTGTTCTCAATGAGTTTTGTTCGTCGGCATGGGCTTCACTTGCTGGGGACTACTACTACATGGTTCTTGTTAGACATTGCATTTTACAGTCAGAATCTCTTCCAGAAGGACATTTTCACTGCCATTGGTTGGCTTCCTCCACCAGAGACGATGAACGCCATTGAAGAAGTTTTCAGAATCGCCAAAGCTCAAACCCTCATTGCATTGTGCAGTACAGTACCCGGGTATTGGTTCACTGTGGCGCTCATTGACGTAATGGGACGGTTTGCAATTCAATTGATGGGGTTTTTCTTCATGACGGTATTTATGTTCGCATTGGCCATTCCATACAAGCATTGGACTTTAGAAGCCAATAGAATTGGGTTTGTTGTGATGTACTCGTTGACGTTCTTCTTCGCGAATTTTGGGCCAAATGCCACCACTTTCGTGGTTCCAGCAGAGATATTTCCAGCCAGACTTCGATCGACGTGCCATGGAATATCGGCTGCTTCTGGAAAAGCAGGGGCAATTGTGGGGGCGTTCGGGTTTCAGTATGCTGAAAAGGGGATTGGAGTGAAGAAGACATTGATAATTCTTGGTGTTGTGAATGCTCTTGGTATGTTCTTCACTCTGTTGGTACCGGAATCGAAGGGGAAGTCTTTGGAAGAAATGTCGGGTGAAGCTGGAGATGAGGCAGAGAGCAAAGCAGACTCAAGGACTCAATCTGATCACAGAACTATGCCTGTTTGA 1578 46.39 MGREQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHKEGSNKPGELPSNIAAAINGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKFPSPSYKDNPTASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQEKIDEGKSKNNDFGLFSMSFVRRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPPPETMNAIEEVFRIAKAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGIGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEAGDEAESKADSRTQSDHRTMPV 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3970309 3971886 - CcPI632755_05g004970.1 Cco05g0497 178125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g0497 525 CDD MFS_PhT 25 493 - -
Cco05g0497 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 499 - -
Cco05g0497 525 FunFam Inorganic phosphate transporter 1-6 20 515 - -
Cco05g0497 525 MobiDBLite consensus disorder prediction 498 525 - -
Cco05g0497 525 NCBIfam phosphate:H+ symporter 11 503 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cco05g0497 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857(InterPro)
Cco05g0497 525 Gene3D MFS general substrate transporter like domains 273 518 IPR036259 -
Cco05g0497 525 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Cco05g0497 525 Pfam Sugar (and other) transporter 26 501 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cco05g0497 525 SUPERFAMILY MFS general substrate transporter 12 501 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g0497 Cco-Chr5:3970309 Cco07g0119 Cco-Chr7:1283427 1.00E-233 dispersed
Cco05g0497 Cco-Chr5:3970309 Cco05g0498 Cco-Chr5:3986016 2.60E-229 tandem
Cco05g1032 Cco-Chr5:9084874 Cco05g0497 Cco-Chr5:3970309 2.30E-187 transposed
Cco05g0497 Cco-Chr5:3970309 Cco06g0725 Cco-Chr6:8259503 2.10E-231 wgd
Cco05g0497 Cco-Chr5:3970309 Cco07g0102 Cco-Chr7:1049884 1.00E-233 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g0497 K08176 - csv:101209582 928.317