Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g0498 | ATGGCTCAAGAACTGGGAGTTCTAAATGCACTTGATGTTGCAAAGACCCAATGGTACCATTTCACAGCCATCATCATAGCTGGAATGGGGTTCTTCACCGATGCCTACGATCTTTTTTGCATTGCGGTCGTGTCGAAGTTGATTGGTCGCATATACTACTACACACCAGGGTCGGGGCGGCCGGGGTCGCTTCCTCCAAACGTGTCGGCGGCAGTGAGTGGCGTGGCGCTTTGTGGAACTCTGAGCGGGCAACTGTTTTTCGGGTGGCTGGGTGACAAGATGGGAAGGAAGAAAGTGTATGGGATAACGTTGATTCTGATGGTGATATGTTCATTTGGGTCAGGGCTAAGTTTTGGGCACTCGGCCAAAGCAACATTGACAACATTATGTCTATTTCGGTTCTGGCTTGGGTTTGGGATTGGTGGTGATTATCCACTTTCCGCAACAATTATGTCCGAATATGCAAATAAGAAAACTCGTGGGGCTTTTATAGCAGCTGTTTTTGCCATGCAAGGTTTCGGAATTTTGGCTGGTGGAATCGTCGCTTTGATTGTTTCAGCTGCATTCAATAATAGATTCCCAGCTCCCTCATATGAGATTGACGCGGTGGGGTCAACCGTACCAGAGGCGGACTATGTATGGCGCATAGTTCTAATGTTTGGCGCCATCCCTGCCGGAATGACATACTACTGGCGTATGAAGATGCCGGAAACAGCCCGTTACACTGCTCTAGTGGCGAAGAATGCGAAACAAGCCGCGGCGGACATGTCGAAAGTGTTACAAGTAGAGGTGGAGGCAGAGGAAGAGAAGCTAGAGAAGATAGTAAGCACAACCAGAAACAACTTTGGCTTGTTTTCCAAACAGTTCCTCAAACGCCATGGCCTCCACTTGCTTGGAACCACAAGCACTTGGTTCTTACTCGACATTGCATTTTACAGCCAAAATCTCTTCCAAAAAGACATCTACACTGCAATTGGTTGGCTCCCTCCCGCAAAAACAATGAGCGGCCTCGAGGAGTGCTATCGTATCGCCAAGGCTCAGACGCTGATTGCACTTTGTGGGACTGTGCCCGGCTATTGGTTCACCGTGGCTCTGATTGATATTATTGGTAGATTCACTATCCAATTAATTGGGTTCATTATGATGACTATTTTCATGTTTGCCATTGCCATCCCTTACAACCATTGGATTTTGAAAGAGAATCGAATTGGGTTTGTGGTCATGTATTCCTTGACCTTCTTCTTCGCCAATTTTGGGCCTAATTCCACTACTTTCATTGTTCCTGCTGAAATATTCCCGGCAAGACTTAGGTCCACATGTCACGGCATCTCTGCTGCCGCCGGCAAGGCTGGTGCAATCATTGGTGCTTTTGGGTTCTTGTATGCAGCGCAGAATCCTGACCCGACAAAAACTGACCCAGGTTACCCACCGGGTATTGGTGTTAAGAACTCTCTTATTGCACTTGGTTGCATCAACTTCCTTGGTGGTTTACTCACCTTGTTAGTGCCCGAACCTAAAGGAAAATCACTTGAGGAGTTGACCGGAGAGAACGAGGCGCCGGAAGAAAATGTCGTCGGGCAACCACAAGTGTGA | 1593 | 47.9 | MAQELGVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCIAVVSKLIGRIYYYTPGSGRPGSLPPNVSAAVSGVALCGTLSGQLFFGWLGDKMGRKKVYGITLILMVICSFGSGLSFGHSAKATLTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAAFNNRFPAPSYEIDAVGSTVPEADYVWRIVLMFGAIPAGMTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEVEAEEEKLEKIVSTTRNNFGLFSKQFLKRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIYTAIGWLPPAKTMSGLEECYRIAKAQTLIALCGTVPGYWFTVALIDIIGRFTIQLIGFIMMTIFMFAIAIPYNHWILKENRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQNPDPTKTDPGYPPGIGVKNSLIALGCINFLGGLLTLLVPEPKGKSLEELTGENEAPEENVVGQPQV | 530 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3986016 | 3988380 | - | CcPI632755_05g004980.1 | Cco05g0498 | 178126 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g0498 | 530 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 8 | 512 | - | - | |
Cco05g0498 | 530 | Pfam | Sugar (and other) transporter | 25 | 513 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cco05g0498 | 530 | SUPERFAMILY | MFS general substrate transporter | 11 | 513 | IPR036259 | - | |
Cco05g0498 | 530 | Gene3D | MFS general substrate transporter like domains | 270 | 528 | IPR036259 | - | |
Cco05g0498 | 530 | Gene3D | MFS general substrate transporter like domains | 19 | 266 | IPR036259 | - | |
Cco05g0498 | 530 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 23 | 507 | IPR020846 | GO:0022857(InterPro) | |
Cco05g0498 | 530 | NCBIfam | phosphate:H+ symporter | 10 | 516 | IPR004738 | GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro) | |
Cco05g0498 | 530 | FunFam | Inorganic phosphate transporter 1-6 | 19 | 526 | - | - | |
Cco05g0498 | 530 | CDD | MFS_PhT | 24 | 506 | - | - | |
Cco05g0498 | 530 | MobiDBLite | consensus disorder prediction | 509 | 530 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco05g0498 | Cco-Chr5:3986016 | Cco06g0725 | Cco-Chr6:8259503 | 3.60E-255 | dispersed | |
Cco05g0497 | Cco-Chr5:3970309 | Cco05g0498 | Cco-Chr5:3986016 | 2.60E-229 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g0498 | K08176 | - | csv:101213007 | 974.541 |