Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g0753 ATGGCCTTCGCCGATCTCATCTTCTTCCTCATCTTTACGGCCATACCCTTTTCGATTTCTCAGCCAACTGACCAAGCTCCACCTCCTGCCGCCGGTTCCTGCAATGGCATCTTCTTGTCCTATACTTTCGATCAAGGAACCAAACTTCCCCCAAATCTCACTGTTCTCGCTCGCCAGCCCTACCGCTTCGAGTCCACTCTCTCCATACTCAACAACGGCCTTACGGAGCTCAAGTCTTGGATGGTTTTTGTGGGGTTTCAACACGATGAGTTCTTGGTCTCCGCCTCCGGCGCTGTCCTCGCCGATGGTAATTCCTTCCCTGGTAACGTTGGTAATGGGACTGTCTTCGCTGGTTTTCCGATGACTGACTTGAAGACCGCCATTGAAACTGCTGGGGACATCACTCAGATGCAAGTCCAAGTCAAGTTACTTGGGACCCAATTTGGGGTTGCCCCTCCGAAAAGTCCGATGCCTTCGAATATATCTCTTGCAAATGATGGATATTTTTGTCCCAAGCCAACTCTACAAGGAAAGAGTGAAATGCACGTCTGTTGCACACCCGATCTACGCGTGAAAACAAATATCACAACCAGTGAAGCGTTCTTGCCTCGTCAAAATGGTGATCTAACGATTATGTATGACGTGACAAGGACATATGATTCAAGTTACTGGGCACAAGTTACAATCTCTAACCATAATCCTCTTGGTCGTCTTGACTATTGGAAATTGAGCTGGGATTGGATGAGGGATGAGTTTATCTATTCAATGAAAGGGGCTTATCCTTCGGTTGTTGATTCTACTGACTGCATTTTTGGTAGACAAGGCACTTATTATCGGGAGTTAGACTTTTCCAATGTATTAAGTTGTGAAAGAAGGCCAACTATTGTTGATTTACCTCCAACCAAGGCCAACGACACCACTCTCGGGTTGATCCCTTTCTGCTGTCGAAATGGGACAATCTTGCCATCTCATATGGACCCGACTAAGTCGATTTCTGCATTTCAGATGCAAGTGTTTAAAATGCCACCGGATCTTAATAGATCCCAGATTACACCACCTCAGAATTGGCAGATCAGTGGCATTCTCAACCCCACATATAAATGTGGCCAGCCAGTGAGGGTAAGTCCTAGCGAATTCCCCGACTCAAGTGGTTTACCACTGAATTCGACTGCAGTAGCGAGCTGGCAGGTTGTTTGCAATATAACACATGCAAAGGATGACACCCCCAAGTGCTGTGTTTCGTTTTCATCTTACTACAATGATTCTGTCATCCCGTGCAGAACGTGTGCTTGTGGATGCTCGCAAAACTCAGCCCGTACCTGTAATGCAACCTCCCCTGCGATGCTCCTCCCACCTGAAGCCCTTCTCGTTCCTTTTGAGAATAGGACCGCCATGGCTGTTGCTTGGGCTGATATTAAACATTTCCCTACTCCTAACCCAATGCCTTGCGCAGATAACTGCGGTGTCAGTATCAATTGGCATTTATATACTGATTATAGAGACGGATGGAGTGCTAGGATCACTCTCTTCAACTGGGACGAAGTGAATTTTGCAGATTGGTTTGCTGCAGTTCAGATGAACAAAGCAGCACCTGGTTTCCAGGCAATGTACTCGTTCAATGCAACCACCTTGGAATTGAATGGTTCCAACAATACTATCTTTATGCAGGGTAATCCTGGACTAAACTATCTCGTGGGAGAAACAGATGGGGCGAACCCATCAAAAGATCCACGGGTACCTGGAAAACAGCAATCTGTGATCTCATTTACAAAGAAGAACATACAAGGTCTTAACATGGCTGCTGGAGATGGGTTCCCCACAAAAGTATTCTTCAATGGGGAGGAATGCTTACTTCCAAAAATGTTCCCAGCCAACTACAGCCAAAGGAACTTAGCTTCATTCGTTTTGAGCATCCTAATGCTACTACTCGTGTTCGTGTTCATTCAGCAATAG 1953 46.24 MAFADLIFFLIFTAIPFSISQPTDQAPPPAAGSCNGIFLSYTFDQGTKLPPNLTVLARQPYRFESTLSILNNGLTELKSWMVFVGFQHDEFLVSASGAVLADGNSFPGNVGNGTVFAGFPMTDLKTAIETAGDITQMQVQVKLLGTQFGVAPPKSPMPSNISLANDGYFCPKPTLQGKSEMHVCCTPDLRVKTNITTSEAFLPRQNGDLTIMYDVTRTYDSSYWAQVTISNHNPLGRLDYWKLSWDWMRDEFIYSMKGAYPSVVDSTDCIFGRQGTYYRELDFSNVLSCERRPTIVDLPPTKANDTTLGLIPFCCRNGTILPSHMDPTKSISAFQMQVFKMPPDLNRSQITPPQNWQISGILNPTYKCGQPVRVSPSEFPDSSGLPLNSTAVASWQVVCNITHAKDDTPKCCVSFSSYYNDSVIPCRTCACGCSQNSARTCNATSPAMLLPPEALLVPFENRTAMAVAWADIKHFPTPNPMPCADNCGVSINWHLYTDYRDGWSARITLFNWDEVNFADWFAAVQMNKAAPGFQAMYSFNATTLELNGSNNTIFMQGNPGLNYLVGETDGANPSKDPRVPGKQQSVISFTKKNIQGLNMAAGDGFPTKVFFNGEECLLPKMFPANYSQRNLASFVLSILMLLLVFVFIQQ 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6189918 6192377 - CcPI632755_05g007530.1 Cco05g0753 178381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g0753 650 Pfam COBRA-like protein 223 402 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cco05g0753 650 PANTHER COBRA-LIKE PROTEIN 7 21 647 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g0753 Cco-Chr5:6189918 Cco10g0528 Cco-Chr10:6301955 2.40E-224 dispersed
Cco05g0753 Cco-Chr5:6189918 Cco07g1675 Cco-Chr7:30751789 2.00E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g0753 - - - 0.0