Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g0783 | ATGGCGTCGTCTCTGATTCTGAATCCTGTGGCGACTTCTGAGCGATCGCGTGATTCATCCAGAAAGAAGAAGAAGAAGAAAGCAACAAGGGAAGATGATCGTCAAGATCAAGATCACATCAAATGGAAATCACAAGCTCAGCATCAAGTTTACTCTTCGAAGCTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTTCTCCTGAATCGACACCAAACGAAACGCCGCGCCGTGGCCGAGCGGTGCGGGAGGCTTCCGATACGGCTCTAGCCTTTACGGCAAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGTAATAAGCACAATCGGCAGAAGGCGCGTGTGACCGGAAACAGCCGCACGAAGAAACCTAGTGTTAGCGTTTTGCGGTTTAGAGGGAAGGGATCACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGGCTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATTCCGGCACTGGAGATGCAGATCCGTGTCATGAACGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCATCTTCTTCTGGTATCGATTCTTCTACCTGA | 627 | 50.56 | MASSLILNPVATSERSRDSSRKKKKKKATREDDRQDQDHIKWKSQAQHQVYSSKLLRALSQVRISSPESTPNETPRRGRAVREASDTALAFTAKGRSRWSRAILTNRLKLKFRNKHNRQKARVTGNSRTKKPSVSVLRFRGKGSPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMNAIVNLVSSSSSSSSGIDSST | 208 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 6521672 | 6522298 | + | CcPI632755_05g007830.1 | Cco05g0783 | 178411 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g0783 | 208 | MobiDBLite | consensus disorder prediction | 25 | 43 | - | - | |
Cco05g0783 | 208 | CDD | bHLH_AtIBH1_like | 136 | 191 | IPR044549 | GO:0006355(InterPro) | |
Cco05g0783 | 208 | MobiDBLite | consensus disorder prediction | 62 | 85 | - | - | |
Cco05g0783 | 208 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 39 | 194 | IPR044660 | GO:0006355(InterPro) | |
Cco05g0783 | 208 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g1613 | Cco-Chr2:28741804 | Cco05g0783 | Cco-Chr5:6521672 | 3.70E-27 | dispersed | |
Cco03g1837 | Cco-Chr3:33071465 | Cco05g0783 | Cco-Chr5:6521672 | 4.90E-30 | dispersed | |
Cco05g0783 | Cco-Chr5:6521672 | Cco06g0447 | Cco-Chr6:4945094 | 6.80E-56 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g0783 | - | - | - | 0.0 |