Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g0909 ATGGGTTTTCGGTTCCTTATGGCGAGAAGAGGAGGAGCAATTGGATCGTGGCTCTGCATCGTTGTGGTTTTAATTTCGGCGCAAATTCACGTCACAGCCAGATCGGATAAGGAAATTAGGGAGAGATTTTATGGAAACTTGATAAACTCGACGGCTCCGACTTCCGGTGACGGTAGCATTGCCCAAATGTTCGATAAGGTTCTTGAGAAGGAGTTCTCTGACAATGATCTGCCTGAAGGTTCTGGTGGAAGCAGCTTTAATAGCAGCGTTGCTGATCAGGAGGCAGAACTGGAGACGGTAGCTAAAATCACACATGAGAAGGGCAAGAAAAATGATAGTCAAAAGGCAAATGGGACAAGGGCATTCCAATTTCAGGATGTTTTTTCTCTGGAAAATGAAGAATCTGATGATGTTACAACGTTGATTGATAAAAAAGACAATGTATTTGTGATGTCAAACAAGAAGTCAAAGTATCCAGTACTTCAAGTAGATTTGAGATTGATCTCAGACTTGGTGGTGGTTATTGTTTCTGCCGCAATTGGAGGAATTATCTTTTCTTGTTTAGGGCAACCTGTTATTGTGGGCTATCTTCTTGCGGGGTCAATCATCGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTTGTATTTCTTCTTTTTGCTTTAGGACTGGAGTTTTCTTTGACAAAGTTAAAAGTTGTGGGAGCTGTGGCTGTTTTTGGAGGTTTTCTACAGATCATCATATTTATGTTCTTGTGTGGTATCATTGCCATGTTAAGTGGAGCTAAACTGTCGGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCTACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGGAATAGCAGTAATACTCTTCATGGTCAAGTTACTATTGGAACACTCATCTTACAGGATTGCGCTGTTGGTTTGTTGTTTGCCTTGCTCCCAGTTTTGGGTGGCCACAATGGTCTTATTTTAGGAATGATATCTATGGGAAAGTTGCTACTGGTGTTGTCAGTATATCTCACAGCCGCATCTATTTTGTCATGGTCATTTGTTCCCCGCTTTCTTAAGCTGATGATGCAGCTGTCGTCTCAAACAAATGAGTTGTATCAGCTTGCTGCTGTGGCATTTTGCTTGCTGTCTGCTTGGTGCAGTGATAAGCTGGGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGATATCTACCACTGACTTCGGTCAGCATACTTTAGATCAGGTGGAACCAATCCGCAATTTATTTGCAGCTTTGTTCCTTTCAAGTATTGGAATGCTCATTCATGTACATTTTCTGTGGAGCCATTTGGACATTTTGCTAGCATCTGTAATGCTGGTTGTGTTTGTCAAGACAGCAGTTGCTACCGTTGTTGCAAAGGCATTTGGATACAGTATTAGGACTTCTTTTCAGGTTGGGGTCATGCTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTAAGCCGTGCTTCAAATCTTCATCTCATTGGGGGGAAAGTTTATTTACTTCTTCTTGGAACAACGGCACTTAGTCTGGTGACCACCCCTCTTCTGTTCAAATTGATACCTGCCGTGTTAAATTTAGGGGTTCTCATGCATTGGTTCCCCTCTGAAAACAACATACAAAATGAGTATAGTCGTCTCCCCTCCTCTGAAAGGTTTGTGAATATCAGAGCCGATTTCTCAGCCTTAATCGATTTTGGTTTTGGAGATTCTTTACTAGGTTGCTTTAGTTTCACCATTGATTCAGCTAGGCAACCTCATGGTCATCTGCCAAATCCATACCGCAAATTGAAAGCTCCACCACTCCCTCCACCTCCCCCCTCCGACGCCGGTCGTTCACATGCATCTCCGGTGAACCAGAAACCACCTGGACCTCGAACTCAGATTCGTAATTCCCGATATCGAACCTGA 1977 43.05 MGFRFLMARRGGAIGSWLCIVVVLISAQIHVTARSDKEIRERFYGNLINSTAPTSGDGSIAQMFDKVLEKEFSDNDLPEGSGGSSFNSSVADQEAELETVAKITHEKGKKNDSQKANGTRAFQFQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFLCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTAASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVATVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLLGTTALSLVTTPLLFKLIPAVLNLGVLMHWFPSENNIQNEYSRLPSSERFVNIRADFSALIDFGFGDSLLGCFSFTIDSARQPHGHLPNPYRKLKAPPLPPPPPSDAGRSHASPVNQKPPGPRTQIRNSRYRT 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7823209 7833758 - CcPI632755_05g009090.1 Cco05g0909 178537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g0909 658 Gene3D - 165 548 IPR038770 -
Cco05g0909 658 MobiDBLite consensus disorder prediction 618 633 - -
Cco05g0909 658 MobiDBLite consensus disorder prediction 611 658 - -
Cco05g0909 658 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 567 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Cco05g0909 658 Pfam Sodium/hydrogen exchanger family 175 541 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1622 Cco-Chr3:30899477 Cco05g0909 Cco-Chr5:7823209 7.50E-185 dispersed
Cco05g0909 Cco-Chr5:7823209 Cco08g1878 Cco-Chr8:29805265 4.90E-185 dispersed
Cco05g0905 Cco-Chr5:7814358 Cco05g0909 Cco-Chr5:7823209 5.50E-06 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g0909 K26735 - csv:101207607 1016.14