Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g0916 | ATGGCTAATACTCCTCTCAAATGGCTCTGTTTATTGCTGTTTTTTCACTGTTTGATTCTTTCAACCTCTCAGCTTCTGAAAACTTATGTTGTTCAAATGGATAAGACTGCAATGCCGGACTCATTTACGGATCATCTTGACTGGTACTCCACAGTGCTAAGCAATGTGGTTGTTAATCTTGAAAGAGAAGGTAATGGGGGAGGAGGTGAAGAGAGGATTATTTACAGTTACCAGAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGCCGAGAAGCTCGAGGAAGAGGATGGGGTATTGGCCATTTTTCCGGAGACGAAGTATGAGCTTCATACTACCAGAAGCCCCAAATTTCTTGGGCTTGAACCAGCTGATAGCAACAGCGCCTGGTCTCAGCAAGTTGCAGACCATGATGTGATTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGACGTCGGAATGTCGCCGGTGCCGGCGCATTGGAAAGGGGAATGTGAAACAGGGCGAGGGTTCACGAAACAGAATTGTAATAGAAAGATCGTTGGGGCCAGAGTGTTCTACCATGGGTATCAAGCTGCAACTGGGAAATTTAACGAGCAGTTGGAGTACAGATCGCCGAGGGATCAAGATGGGCATGGAACTCATACGGCAGCCACTGTCGCTGGCTCTCCAGTGCCCGGCGCGAGCCTCCTTGGTTATGCATATGGAACGGCCAGAGGAATGGCGCCCGGAGCTAGAATTGCGGCTTACAAAGTTTGTTGGGTTGGTGGCTGTTTTAGCTCCGACATATTGTCGGCTGTTGACAGAGCTGTGGCCGACGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGTCTCTCCGTTGCAGCATTTGGAGCAATGGAGATGGGCGTGTTTGTCTCCTGCTCGGCCGGAAATGGAGGGCCGGACCCTGTCAGTCTCACAAATGTATCACCATGGATAACCACCGTCGGGGCTAGCACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGTAATGGCAGAACAGTCACCGGCGTTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAGCAATTCCCAGTTGTATACATGGGGAGTAACTCGAGCAGTCCTGATCCGAGCTCCCTGTGTTTAGAAGGAACTTTAGATCCTCATTTCGTGGCCGGAAAAATTGTGATATGCGATCGCGGAATAAGCCCTCGGGTTCAGAAGGGTGTGGTGGTGAAAAATGCAGGTGGGGTTGGGATGATTCTGTCTAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGACTGCCATTTGGTACCGGCAGTTGCCGTCGGGGAAAGAGAAGGCAAAGCAATTAAGCAGTATGCATTAACGAATCGAAAAGCGACGGCGACTTTAGGATTTTTAGGGACAAGATTGGGGGTAAAACCTTCGCCGGTGGTGGCGGCGTTTTCATCCAGAGGACCAAATTTCCTCACACTGGAGATCCTCAAGCCCGATCTGGTGGCTCCTGGCGTTAACATCCTCGCCGCTTGGACCGGAAAAACAGGGCCGTCGAGCTTGACGACGGATACAAGAAGGGTAAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTAGCGGCTCTGATCAAATCGAAGCATCCCGATTGGAGCCCGTCGGCGATCAAATCGGCACTAATGACCACCGCTTACGTCCACGACAACACCTATAAACCTCTCAAAGACTCCTCTGCTGCATCACCGTCAAGTCCGTACGACCATGGCGCCGGCCACATAAACCCTAGAAAAGCCCTCGATCCTGGTTTGGTTTACGAAATTCAGCCGCAAGATTACTTCGACTTCCTATGTACGCAGGATTTAACCCCTACACAGCTTAAAGTGTTCTCCAAATATTCGAACAGATCATGCCATCGTCTTCTCCCCAACCCTGGAGACTTGAATTATCCGGCTATCTCCGCTGTTTTTCCTGAGAAAACCTCCGTCACTTCCCTGACCCTTCACAGAATCGTCACCAACGTCGGCCCTGCAACCTCCAGTTATCGTGCAGTGGTGACTCCGTTCAACGGCGCCGCCGTGAAAGTTGAGCCGGAGAGTCTGAACTTCACAAGAAGGTATGAGAAGCTTTCTTACAGAATCACATTTCTGACGAAGAAGAGACAGAGTATCCCGGAATTTGGAGGGCTAATTTGGAAGGACGGAACACATAAAGTGAGAAGCCCCATTGCGATCACTTGGTTGTCGTTTGTTTGA | 2322 | 49.91 | MANTPLKWLCLLLFFHCLILSTSQLLKTYVVQMDKTAMPDSFTDHLDWYSTVLSNVVVNLEREGNGGGGEERIIYSYQNVFHGVAARLSEEEAEKLEEEDGVLAIFPETKYELHTTRSPKFLGLEPADSNSAWSQQVADHDVIVGVLDTGIWPESESFNDVGMSPVPAHWKGECETGRGFTKQNCNRKIVGARVFYHGYQAATGKFNEQLEYRSPRDQDGHGTHTAATVAGSPVPGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTVTGVSLYRGRITIPENKQFPVVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGVGMILSNTAANGEELVADCHLVPAVAVGEREGKAIKQYALTNRKATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSAASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFDFLCTQDLTPTQLKVFSKYSNRSCHRLLPNPGDLNYPAISAVFPEKTSVTSLTLHRIVTNVGPATSSYRAVVTPFNGAAVKVEPESLNFTRRYEKLSYRITFLTKKRQSIPEFGGLIWKDGTHKVRSPIAITWLSFV | 773 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7916287 | 7918608 | + | CcPI632755_05g009160.1 | Cco05g0916 | 178544 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g0916 | 773 | CDD | PA_subtilisin_like | 354 | 483 | - | - | |
Cco05g0916 | 773 | Pfam | PA domain | 381 | 469 | IPR003137 | - | |
Cco05g0916 | 773 | Gene3D | - | 639 | 770 | - | - | |
Cco05g0916 | 773 | Pfam | Peptidase inhibitor I9 | 28 | 114 | IPR010259 | - | |
Cco05g0916 | 773 | FunFam | Subtilisin-like protease SBT1.5 | 141 | 363 | - | - | |
Cco05g0916 | 773 | FunFam | subtilisin-like protease SBT1.5 | 347 | 490 | - | - | |
Cco05g0916 | 773 | SUPERFAMILY | Subtilisin-like | 113 | 626 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco05g0916 | 773 | FunFam | Subtilisin-like protease SBT1.9 | 17 | 114 | - | - | |
Cco05g0916 | 773 | Gene3D | - | 347 | 491 | - | - | |
Cco05g0916 | 773 | CDD | Peptidases_S8_3 | 111 | 588 | IPR034197 | - | |
Cco05g0916 | 773 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 552 | 562 | IPR023828 | - | |
Cco05g0916 | 773 | Gene3D | Peptidase S8/S53 domain | 141 | 635 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco05g0916 | 773 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 19 | 114 | IPR037045 | - | |
Cco05g0916 | 773 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 28 | 765 | IPR045051 | - | |
Cco05g0916 | 773 | PRINTS | Subtilisin serine protease family (S8) signature | 139 | 158 | IPR015500 | - | |
Cco05g0916 | 773 | PRINTS | Subtilisin serine protease family (S8) signature | 551 | 567 | IPR015500 | - | |
Cco05g0916 | 773 | PRINTS | Subtilisin serine protease family (S8) signature | 217 | 230 | IPR015500 | - | |
Cco05g0916 | 773 | Pfam | Subtilase family | 140 | 595 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco05g0916 | 773 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 110 | 622 | - | - | |
Cco05g0916 | 773 | Pfam | Fibronectin type-III domain | 669 | 767 | IPR041469 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g1491 | Cco-Chr4:30320425 | Cco05g0916 | Cco-Chr5:7916287 | 1.10E-231 | dispersed | |
Cco05g0916 | Cco-Chr5:7916287 | Cco08g1821 | Cco-Chr8:29245173 | 3.30E-233 | dispersed | |
Cco01g1038 | Cco-Chr1:13424511 | Cco05g0916 | Cco-Chr5:7916287 | 1.40E-82 | transposed | |
Cco04g2337 | Cco-Chr4:36816173 | Cco05g0916 | Cco-Chr5:7916287 | 3.90E-86 | transposed | |
Cco09g0134 | Cco-Chr9:1183102 | Cco05g0916 | Cco-Chr5:7916287 | 5.70E-212 | transposed | |
Cco01g0344 | Cco-Chr1:3453942 | Cco05g0916 | Cco-Chr5:7916287 | 6.70E-149 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g0916 | - | - | - | 0.0 |