Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g0916 ATGGCTAATACTCCTCTCAAATGGCTCTGTTTATTGCTGTTTTTTCACTGTTTGATTCTTTCAACCTCTCAGCTTCTGAAAACTTATGTTGTTCAAATGGATAAGACTGCAATGCCGGACTCATTTACGGATCATCTTGACTGGTACTCCACAGTGCTAAGCAATGTGGTTGTTAATCTTGAAAGAGAAGGTAATGGGGGAGGAGGTGAAGAGAGGATTATTTACAGTTACCAGAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGCCGAGAAGCTCGAGGAAGAGGATGGGGTATTGGCCATTTTTCCGGAGACGAAGTATGAGCTTCATACTACCAGAAGCCCCAAATTTCTTGGGCTTGAACCAGCTGATAGCAACAGCGCCTGGTCTCAGCAAGTTGCAGACCATGATGTGATTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGACGTCGGAATGTCGCCGGTGCCGGCGCATTGGAAAGGGGAATGTGAAACAGGGCGAGGGTTCACGAAACAGAATTGTAATAGAAAGATCGTTGGGGCCAGAGTGTTCTACCATGGGTATCAAGCTGCAACTGGGAAATTTAACGAGCAGTTGGAGTACAGATCGCCGAGGGATCAAGATGGGCATGGAACTCATACGGCAGCCACTGTCGCTGGCTCTCCAGTGCCCGGCGCGAGCCTCCTTGGTTATGCATATGGAACGGCCAGAGGAATGGCGCCCGGAGCTAGAATTGCGGCTTACAAAGTTTGTTGGGTTGGTGGCTGTTTTAGCTCCGACATATTGTCGGCTGTTGACAGAGCTGTGGCCGACGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGTCTCTCCGTTGCAGCATTTGGAGCAATGGAGATGGGCGTGTTTGTCTCCTGCTCGGCCGGAAATGGAGGGCCGGACCCTGTCAGTCTCACAAATGTATCACCATGGATAACCACCGTCGGGGCTAGCACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGTAATGGCAGAACAGTCACCGGCGTTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAGCAATTCCCAGTTGTATACATGGGGAGTAACTCGAGCAGTCCTGATCCGAGCTCCCTGTGTTTAGAAGGAACTTTAGATCCTCATTTCGTGGCCGGAAAAATTGTGATATGCGATCGCGGAATAAGCCCTCGGGTTCAGAAGGGTGTGGTGGTGAAAAATGCAGGTGGGGTTGGGATGATTCTGTCTAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGACTGCCATTTGGTACCGGCAGTTGCCGTCGGGGAAAGAGAAGGCAAAGCAATTAAGCAGTATGCATTAACGAATCGAAAAGCGACGGCGACTTTAGGATTTTTAGGGACAAGATTGGGGGTAAAACCTTCGCCGGTGGTGGCGGCGTTTTCATCCAGAGGACCAAATTTCCTCACACTGGAGATCCTCAAGCCCGATCTGGTGGCTCCTGGCGTTAACATCCTCGCCGCTTGGACCGGAAAAACAGGGCCGTCGAGCTTGACGACGGATACAAGAAGGGTAAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTAGCGGCTCTGATCAAATCGAAGCATCCCGATTGGAGCCCGTCGGCGATCAAATCGGCACTAATGACCACCGCTTACGTCCACGACAACACCTATAAACCTCTCAAAGACTCCTCTGCTGCATCACCGTCAAGTCCGTACGACCATGGCGCCGGCCACATAAACCCTAGAAAAGCCCTCGATCCTGGTTTGGTTTACGAAATTCAGCCGCAAGATTACTTCGACTTCCTATGTACGCAGGATTTAACCCCTACACAGCTTAAAGTGTTCTCCAAATATTCGAACAGATCATGCCATCGTCTTCTCCCCAACCCTGGAGACTTGAATTATCCGGCTATCTCCGCTGTTTTTCCTGAGAAAACCTCCGTCACTTCCCTGACCCTTCACAGAATCGTCACCAACGTCGGCCCTGCAACCTCCAGTTATCGTGCAGTGGTGACTCCGTTCAACGGCGCCGCCGTGAAAGTTGAGCCGGAGAGTCTGAACTTCACAAGAAGGTATGAGAAGCTTTCTTACAGAATCACATTTCTGACGAAGAAGAGACAGAGTATCCCGGAATTTGGAGGGCTAATTTGGAAGGACGGAACACATAAAGTGAGAAGCCCCATTGCGATCACTTGGTTGTCGTTTGTTTGA 2322 49.91 MANTPLKWLCLLLFFHCLILSTSQLLKTYVVQMDKTAMPDSFTDHLDWYSTVLSNVVVNLEREGNGGGGEERIIYSYQNVFHGVAARLSEEEAEKLEEEDGVLAIFPETKYELHTTRSPKFLGLEPADSNSAWSQQVADHDVIVGVLDTGIWPESESFNDVGMSPVPAHWKGECETGRGFTKQNCNRKIVGARVFYHGYQAATGKFNEQLEYRSPRDQDGHGTHTAATVAGSPVPGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTVTGVSLYRGRITIPENKQFPVVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGVGMILSNTAANGEELVADCHLVPAVAVGEREGKAIKQYALTNRKATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSAASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFDFLCTQDLTPTQLKVFSKYSNRSCHRLLPNPGDLNYPAISAVFPEKTSVTSLTLHRIVTNVGPATSSYRAVVTPFNGAAVKVEPESLNFTRRYEKLSYRITFLTKKRQSIPEFGGLIWKDGTHKVRSPIAITWLSFV 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7916287 7918608 + CcPI632755_05g009160.1 Cco05g0916 178544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g0916 773 CDD PA_subtilisin_like 354 483 - -
Cco05g0916 773 Pfam PA domain 381 469 IPR003137 -
Cco05g0916 773 Gene3D - 639 770 - -
Cco05g0916 773 Pfam Peptidase inhibitor I9 28 114 IPR010259 -
Cco05g0916 773 FunFam Subtilisin-like protease SBT1.5 141 363 - -
Cco05g0916 773 FunFam subtilisin-like protease SBT1.5 347 490 - -
Cco05g0916 773 SUPERFAMILY Subtilisin-like 113 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco05g0916 773 FunFam Subtilisin-like protease SBT1.9 17 114 - -
Cco05g0916 773 Gene3D - 347 491 - -
Cco05g0916 773 CDD Peptidases_S8_3 111 588 IPR034197 -
Cco05g0916 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Cco05g0916 773 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco05g0916 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Cco05g0916 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 765 IPR045051 -
Cco05g0916 773 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cco05g0916 773 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Cco05g0916 773 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Cco05g0916 773 Pfam Subtilase family 140 595 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco05g0916 773 ProSiteProfiles Serine proteases, subtilase domain profile. 110 622 - -
Cco05g0916 773 Pfam Fibronectin type-III domain 669 767 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1491 Cco-Chr4:30320425 Cco05g0916 Cco-Chr5:7916287 1.10E-231 dispersed
Cco05g0916 Cco-Chr5:7916287 Cco08g1821 Cco-Chr8:29245173 3.30E-233 dispersed
Cco01g1038 Cco-Chr1:13424511 Cco05g0916 Cco-Chr5:7916287 1.40E-82 transposed
Cco04g2337 Cco-Chr4:36816173 Cco05g0916 Cco-Chr5:7916287 3.90E-86 transposed
Cco09g0134 Cco-Chr9:1183102 Cco05g0916 Cco-Chr5:7916287 5.70E-212 transposed
Cco01g0344 Cco-Chr1:3453942 Cco05g0916 Cco-Chr5:7916287 6.70E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g0916 - - - 0.0