Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco05g0977 | ATGTGGGTGATTAGGGTTTCAATCATGGTTTTGTTTGGGAAAGTTGTGGTTTCATGGTGGATTTTGCCTGTTTTGGCTCATAATAATTTGAAGAGAAATGGATTTGAAGGTCCTTCTCCTACTTTCCCTCTTGGAAATATTACAGAGATGAAGAAGATAATGAAAGCTGCTGCAGCCATTAGTGGATCATCATCTACCTCCTTTGCTTCTTCAAATAATTTCTCCCATGATATTCATTCAACTATTTTCCCCCACTTTGCTCAATGGCAGAATTCTTATGGGAAGAAGTTTGTATATTGGTTGGGGACAGAGCCATTTTTGTACATAGCAGATCCACAGCTTGTGAAGAAGATATCTGAAGCTGTGATGGGGAAGAATTGGGGGAAGCCAGCTGTCTTCAGAAACGACCGAGAACCGATGTTCGGCGATGGCCTCGTCATGACCGAAGGTGACGACTGGATTCGCCATCGCCATATCCTCACTCCCGCCTTCAACCCCGCCAATTTGAAGGCAATGACAAAGTTCATGGTGGAGTCCACCACTAAAATGGTAAAAGAGTGGAGAAGCCTCGTAAACTCCGGGCAACCGGAAATCGACGTGGAAAGAGAAATTACGGCAACCGCCGGCGACATAATCGCAAAGGCAAGCTTCGGAATGTCGAGTGGCGGCGGGGGGGAAGAGGCGTTGAACAACCTGAGGGCTCTTCAGTTAACTCTGTTCTCCAACAGCAGCTACGTTGGGGTCCCATTCAGCAGTGTATTTCTGTACCCTGCCCGAACCCTAGCCGCCAAGAAACTGGGTGCCCAAATCGACCGCCTCTTCTTTTCCATCATATCTCACAGGAAACTCTCCCCCGATTCCGATTCCGATTTGCTGACTCGGTTGATTCAGAGTCAAAGCAACCAGAGGGTGGCCCTGACCCCGAGAGAAGTGGTGGACGAGTGTAAGACATTCTTCTTCGGCGGCCATGAGACGACGGCGCTGGCCATCAGTTGGACGCTGCTGCTGTTGGCCACTCGCCCGGAATGGCAAAACATTTTACGAGAGGAGATTAAAGAAGTGATCGGAGATAAAGATATTGATTTCTCCATGCTTTCTTCACTCAAAAAGATGGGATGGGTGTGGAATGAGGTACTTAGGCTATACCCCTCAGCCCCAAACATACAAAGACAAGCAAAAGGAGACATTGATTTAGGGGACATGAAGATCCCAAAAGGTACCAACATATGGATAGACATCGTCGCAATGCATCACGACTCAACCCTATGGGGCGACGAAGTGAACGAGTTCAAGCCAGAGAGGTTCCAACAAGACACCATTCATGGCGGGTGCAACCACAAGATGGGATATTTGCCTTTTGGTTTTGGAGGGAGAATGTGCATTGGTAGAAACTTATCTTCTATGGAGTATAAGATTGTCCTAACCCTAATTCTTTCTACCTTTTCACTCTCTCTTTCTCCTTCTTACTCTCATTCTCCTGCTACTTTGCTCTCTCTGAGACCTGCCCATGGCATTCCTCTCATTTTAAGCCCGCTTTATCCTTAA | 1545 | 47.18 | MWVIRVSIMVLFGKVVVSWWILPVLAHNNLKRNGFEGPSPTFPLGNITEMKKIMKAAAAISGSSSTSFASSNNFSHDIHSTIFPHFAQWQNSYGKKFVYWLGTEPFLYIADPQLVKKISEAVMGKNWGKPAVFRNDREPMFGDGLVMTEGDDWIRHRHILTPAFNPANLKAMTKFMVESTTKMVKEWRSLVNSGQPEIDVEREITATAGDIIAKASFGMSSGGGGEEALNNLRALQLTLFSNSSYVGVPFSSVFLYPARTLAAKKLGAQIDRLFFSIISHRKLSPDSDSDLLTRLIQSQSNQRVALTPREVVDECKTFFFGGHETTALAISWTLLLLATRPEWQNILREEIKEVIGDKDIDFSMLSSLKKMGWVWNEVLRLYPSAPNIQRQAKGDIDLGDMKIPKGTNIWIDIVAMHHDSTLWGDEVNEFKPERFQQDTIHGGCNHKMGYLPFGFGGRMCIGRNLSSMEYKIVLTLILSTFSLSLSPSYSHSPATLLSLRPAHGIPLILSPLYP | 514 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 8531224 | 8534374 | + | CcPI632755_05g009770.1 | Cco05g0977 | 178605 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco05g0977 | 514 | SUPERFAMILY | Cytochrome P450 | 79 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | PRINTS | E-class P450 group I signature | 330 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | PRINTS | E-class P450 group I signature | 90 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | PRINTS | E-class P450 group I signature | 310 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco05g0977 | 514 | PRINTS | P450 superfamily signature | 321 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | Gene3D | Cytochrome P450 | 21 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g0977 | 514 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 18 | 506 | IPR050665 | GO:0004497(PANTHER) | |
| Cco05g0977 | 514 | Pfam | Cytochrome P450 | 81 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco05g0977 | Cco-Chr5:8531224 | Cco05g1351 | Cco-Chr5:14372675 | 8.20E-87 | dispersed | |
| Cco01g0469 | Cco-Chr1:4582305 | Cco05g0977 | Cco-Chr5:8531224 | 3.50E-161 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco05g0977 | - | - | - | 0.0 |