Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g0997 ATGGCGGCCGGCCTCTCCGCCGCCTTAGTGCCCAAACCACTCCATCTCTTCCTTACTTCCTCCCATCTCTCCCCTAAACCTCGAACTCCGTTTCTGTTTCCACCTTCTGTCTTCCGGAACAGTAGATTCCAATGGAAGATGCGGAAAAAAACTCTGTTCACTGTCTGTGTACTCGTTGAGGATCAAAATAGTTCCGGTGAGGTGGAGAATCTCTCCGATGAAGGATCGCCGATTGTAATCCCTCAGATCCCATCGCCTCATGTTTCAGAAAGATTAGCAAGGAAGAAATCGGAGCGCTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTTGGAATTACCTCCATGGCTGTCATGGCGGTTTACTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCTGTTGGTGCCGCTGTCGGGATGGAGTTCTGGGCGAGATGGGCTCATAGGGCTCTCTGGCACGCTTCCTTATGGCATATGCACGAGTCGCACCATAAACCAAGAGAAGGACCGTTCGAATTGAACGATGTTTTCGCCATTGTCAACGCTGTGCCCGCCATAGCTCTTCTTTCTTACGGCTTCTTCCATAAAGGCCTTGTTCCTGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACGGTCTTCGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCATAAAAGATTCCCTGTGGGTCCCATCGCCAACGTCCCCTATTTCAGAAAGGTCGCTGCTGCTCACCAGCTTCACCATTCAGACAAGTTCAACGGTGTGCCATATGGGCTGTTTTTGGGTCCGAAGGAATTAGAGGAAGTGGGAGGCCTAGAAGAATTGGAGAAGGAAATCAACAGAAGAATAAAATTGACGGCCCCAAAATCAAACCATGGTTCTTCATCAACCAATATTATGTGA 951 49.11 MAAGLSAALVPKPLHLFLTSSHLSPKPRTPFLFPPSVFRNSRFQWKMRKKTLFTVCVLVEDQNSSGEVENLSDEGSPIVIPQIPSPHVSERLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHASLWHMHESHHKPREGPFELNDVFAIVNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEINRRIKLTAPKSNHGSSSTNIM 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8798636 8801478 - CcPI632755_05g009970.1 Cco05g0997 178625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g0997 316 Pfam Fatty acid hydroxylase 149 277 IPR006694 GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro)
Cco05g0997 316 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 6 302 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0248 Cco-Chr1:2346070 Cco05g0997 Cco-Chr5:8798636 1.80E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g0997 K15746 - csv:101212140 584.334