Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g1032 | ATGACCATCGCCGTGCTCGATGCCCTCGACAACGCTCGTACACAATGGTACCATATTACGGCTATAGTCATAGCCGGGATGGGATTCTTTACGGACGCCTATGATCTTTTTTGCATCTCGACCGTGTCGAAGCTTCTTGGTCGACTTTATTACTTTGATCCAGATAGTAGTAAGCCTGGAAAACTTCCAAACCCCGTCAACAACGCCGTCGTTGGAGTTGCGCTAGTCGGAACACTAATGGGGCAGCTTTTCTTTGGGTGGTTGGGTGATAAACTTGGAAGGAAGAAAGTTTATGGTGTTACCCTTATTCTTATGGCCTTTTGTGCCATTTGCTCAGGGCTTTCTTTTGGGTCAACATCAAAATCAGTGATAGGTACACTTTGTTTCTTTAGATTTTGGCTTGGATTTGGCATTGGTGGCGACTACCCACTTTCAGCCACCATCATGTCGGAATATGCCAACAAAAAAACTCGAGGAGCTTTCATTGCGGCTGTCTTTGCCATGCAGGGTGTGGGGCTAATATTTGCAGGGCTAGTATCAATGATCCTATCAAAAATCTTCCTGACCCTTCATGATGCTCCCATTTACAAACACGACCCTGTATTTTCCACACAACCTCAAGGAGATTTCCTATGGAGAATTGTGCTAATGCTTGGTGCTTTACCAGCCATTTTAACTTACTATTGGAGAATGAAAATGCCTGAAACAGGACGTTACACTGCCCTTATTGAAGGCAATGCCAAACAAGCTGCTGCAGATATGGGAAAAGTTTTAGAGATCACAATTCAAGCTGAGCAAGACAAACTTGCCAATTTCAAATCAGCCAATGAATATGGTTTGTTGTCTAAAGAATTCTTTCGTCGCCATGGACTCCATTTGATTGGAACTACCACTACTTGGTTCTTGTTGGACATTGCATTTTATAGCAATAACCTTACTCAAAAAGACATATTCCCAGCTATGAATTTGACCAAACAGCCGGATGCAGTTAATGCATTGGAAGAAGTTTATGAAACTTCTAAAGCTATGTTCCTTGTTGCCTTACTTGGAACTTTCCCTGGATATTGGTTCACAGTTTTCCTCATTGAGAAGCTTGGAAGGTTCAAAATCCAATTGATTGGATTCTTCATGATGTCAGTTTTCATGGCCGTCCTCGGTGTTCGTTACAATTACTTGAAGCACCATCCCGCCGAGTTCGCCGTGCTTTATGGCTTGACATTCTTCTTTGCCAACTTTGGTCCTAATAGCACCACCTTTGTCCTCCCTGCAGAGCTCTTCCCGACTAGGGTCCGATCGACATGTCATGCGCTAAGTGCTGCATCCGGGAAGGCCGGTGCGATCGTTGGAGCTTTCGGGGTGCAAAATTATACACTAGATGGAAACCCTAGTAAGATTCAAAAGGCTATGATTTTCTTGGCCTTCACTAACATGCTAGGGTTTGTGTTTACATTCTTGGTGACGGAGACTAAAGGGCGGTCGTTGGAGGAGATCTCCGGCGAGGACGGGCGCGCAGGTGATAATGAAAGTCAAATGCCAGTTAGATCAACGGGAAAGCCAGGAGGGCTACACTTCCGCAAGGAGGTTTTTACAACGGTGGCATTAGTTGTTCATGCAATGACTGCCCTTGTTTCCCCTTCAACTCAGTGGGTTTCGCAGCCTAAGGATTCATTGGCGCTATCTTATGATGCAGCTTGGTTGAGGGAGCCTTGCAAATGTTGGTCTTGGGAAGTCGTAATGTTTGGGGCTCTCCCAGTTTTTGCCTTGGAGTTACTGGCTATAGTAGAGGGGCTCCAACTATTTAATGCGAATCATTTTCATGCATTGGTGGTGGAAGCAAACTTGCTTAGCGTTGTTCAAATCTTGAATCATGAAGAGGTTAACCTTATAGAGGTAGTTTCAATTTCTATGGAGGTATAA | 1917 | 44.55 | MTIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPDSSKPGKLPNPVNNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLILMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLIFAGLVSMILSKIFLTLHDAPIYKHDPVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEITIQAEQDKLANFKSANEYGLLSKEFFRRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKQPDAVNALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSVFMAVLGVRYNYLKHHPAEFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGRAGDNESQMPVRSTGKPGGLHFRKEVFTTVALVVHAMTALVSPSTQWVSQPKDSLALSYDAAWLREPCKCWSWEVVMFGALPVFALELLAIVEGLQLFNANHFHALVVEANLLSVVQILNHEEVNLIEVVSISMEV | 638 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9084874 | 9088639 | - | CcPI632755_05g010320.1 | Cco05g1032 | 178660 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g1032 | 638 | FunFam | Inorganic phosphate transporter 1-6 | 17 | 511 | - | - | |
Cco05g1032 | 638 | SUPERFAMILY | MFS general substrate transporter | 9 | 498 | IPR036259 | - | |
Cco05g1032 | 638 | MobiDBLite | consensus disorder prediction | 496 | 516 | - | - | |
Cco05g1032 | 638 | NCBIfam | phosphate:H+ symporter | 6 | 500 | IPR004738 | GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro) | |
Cco05g1032 | 638 | Pfam | Sugar (and other) transporter | 23 | 498 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cco05g1032 | 638 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 6 | 496 | - | - | |
Cco05g1032 | 638 | CDD | MFS_PhT | 22 | 490 | - | - | |
Cco05g1032 | 638 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 21 | 491 | IPR020846 | GO:0022857(InterPro) | |
Cco05g1032 | 638 | Gene3D | MFS general substrate transporter like domains | 17 | 514 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco05g1032 | Cco-Chr5:9084874 | Cco06g0725 | Cco-Chr6:8259503 | 5.80E-183 | dispersed | |
Cco05g1032 | Cco-Chr5:9084874 | Cco05g0497 | Cco-Chr5:3970309 | 2.30E-187 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g1032 | K08176 | - | csv:101210631 | 946.806 |