Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g1032 ATGACCATCGCCGTGCTCGATGCCCTCGACAACGCTCGTACACAATGGTACCATATTACGGCTATAGTCATAGCCGGGATGGGATTCTTTACGGACGCCTATGATCTTTTTTGCATCTCGACCGTGTCGAAGCTTCTTGGTCGACTTTATTACTTTGATCCAGATAGTAGTAAGCCTGGAAAACTTCCAAACCCCGTCAACAACGCCGTCGTTGGAGTTGCGCTAGTCGGAACACTAATGGGGCAGCTTTTCTTTGGGTGGTTGGGTGATAAACTTGGAAGGAAGAAAGTTTATGGTGTTACCCTTATTCTTATGGCCTTTTGTGCCATTTGCTCAGGGCTTTCTTTTGGGTCAACATCAAAATCAGTGATAGGTACACTTTGTTTCTTTAGATTTTGGCTTGGATTTGGCATTGGTGGCGACTACCCACTTTCAGCCACCATCATGTCGGAATATGCCAACAAAAAAACTCGAGGAGCTTTCATTGCGGCTGTCTTTGCCATGCAGGGTGTGGGGCTAATATTTGCAGGGCTAGTATCAATGATCCTATCAAAAATCTTCCTGACCCTTCATGATGCTCCCATTTACAAACACGACCCTGTATTTTCCACACAACCTCAAGGAGATTTCCTATGGAGAATTGTGCTAATGCTTGGTGCTTTACCAGCCATTTTAACTTACTATTGGAGAATGAAAATGCCTGAAACAGGACGTTACACTGCCCTTATTGAAGGCAATGCCAAACAAGCTGCTGCAGATATGGGAAAAGTTTTAGAGATCACAATTCAAGCTGAGCAAGACAAACTTGCCAATTTCAAATCAGCCAATGAATATGGTTTGTTGTCTAAAGAATTCTTTCGTCGCCATGGACTCCATTTGATTGGAACTACCACTACTTGGTTCTTGTTGGACATTGCATTTTATAGCAATAACCTTACTCAAAAAGACATATTCCCAGCTATGAATTTGACCAAACAGCCGGATGCAGTTAATGCATTGGAAGAAGTTTATGAAACTTCTAAAGCTATGTTCCTTGTTGCCTTACTTGGAACTTTCCCTGGATATTGGTTCACAGTTTTCCTCATTGAGAAGCTTGGAAGGTTCAAAATCCAATTGATTGGATTCTTCATGATGTCAGTTTTCATGGCCGTCCTCGGTGTTCGTTACAATTACTTGAAGCACCATCCCGCCGAGTTCGCCGTGCTTTATGGCTTGACATTCTTCTTTGCCAACTTTGGTCCTAATAGCACCACCTTTGTCCTCCCTGCAGAGCTCTTCCCGACTAGGGTCCGATCGACATGTCATGCGCTAAGTGCTGCATCCGGGAAGGCCGGTGCGATCGTTGGAGCTTTCGGGGTGCAAAATTATACACTAGATGGAAACCCTAGTAAGATTCAAAAGGCTATGATTTTCTTGGCCTTCACTAACATGCTAGGGTTTGTGTTTACATTCTTGGTGACGGAGACTAAAGGGCGGTCGTTGGAGGAGATCTCCGGCGAGGACGGGCGCGCAGGTGATAATGAAAGTCAAATGCCAGTTAGATCAACGGGAAAGCCAGGAGGGCTACACTTCCGCAAGGAGGTTTTTACAACGGTGGCATTAGTTGTTCATGCAATGACTGCCCTTGTTTCCCCTTCAACTCAGTGGGTTTCGCAGCCTAAGGATTCATTGGCGCTATCTTATGATGCAGCTTGGTTGAGGGAGCCTTGCAAATGTTGGTCTTGGGAAGTCGTAATGTTTGGGGCTCTCCCAGTTTTTGCCTTGGAGTTACTGGCTATAGTAGAGGGGCTCCAACTATTTAATGCGAATCATTTTCATGCATTGGTGGTGGAAGCAAACTTGCTTAGCGTTGTTCAAATCTTGAATCATGAAGAGGTTAACCTTATAGAGGTAGTTTCAATTTCTATGGAGGTATAA 1917 44.55 MTIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPDSSKPGKLPNPVNNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLILMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLIFAGLVSMILSKIFLTLHDAPIYKHDPVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEITIQAEQDKLANFKSANEYGLLSKEFFRRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKQPDAVNALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSVFMAVLGVRYNYLKHHPAEFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGRAGDNESQMPVRSTGKPGGLHFRKEVFTTVALVVHAMTALVSPSTQWVSQPKDSLALSYDAAWLREPCKCWSWEVVMFGALPVFALELLAIVEGLQLFNANHFHALVVEANLLSVVQILNHEEVNLIEVVSISMEV 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9084874 9088639 - CcPI632755_05g010320.1 Cco05g1032 178660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g1032 638 FunFam Inorganic phosphate transporter 1-6 17 511 - -
Cco05g1032 638 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
Cco05g1032 638 MobiDBLite consensus disorder prediction 496 516 - -
Cco05g1032 638 NCBIfam phosphate:H+ symporter 6 500 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cco05g1032 638 Pfam Sugar (and other) transporter 23 498 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cco05g1032 638 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 496 - -
Cco05g1032 638 CDD MFS_PhT 22 490 - -
Cco05g1032 638 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857(InterPro)
Cco05g1032 638 Gene3D MFS general substrate transporter like domains 17 514 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g1032 Cco-Chr5:9084874 Cco06g0725 Cco-Chr6:8259503 5.80E-183 dispersed
Cco05g1032 Cco-Chr5:9084874 Cco05g0497 Cco-Chr5:3970309 2.30E-187 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g1032 K08176 - csv:101210631 946.806