Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g1118 ATGGAAATGAAAGGAGGAAGATCACTGGCTGAGACGCCTACCTACTCGGTTGCTTCTGTGGTTACCGTCATGGTCTTTGTCTGCTTGGTGGTGGAGCGGGCAATCTATAGGTTTGGAAAGTGGTTGAAGAAGACCAAGAGAAAGGCTCTGTTTGCTTCTTTGGAGAAGATCAAGGAAGAGCTGATGCTGCTTGGACTAATATCTTTGCTGCTGGCACAATGTGCAAGGTGTATCTCTGAAATTTGTGTGAACTCATCCCTTTTCACGAGCAGATTCTACATTTGTTCAGAAGAAGATTATGCCACCAATGAACATATTCTGCTTGAAAATTCTCTACTATCTCCTAATGAAACTGTCATTTCTCGAAGAGGATTAAGTGTTCTCCCGCATCAATGTGGTGAGGGTCGCGAGCCTTTTGTTTCATACGAGGGACTTGAACAACTTCACCGCTTCTTATTCGTTCTTGGGATCACTCATGTTCTTTATAGCTGTCTAGCTGTTGGTTTGGCAATGAGTAAGATATACAGTTGGAGGAAATGGGAAAATCAAGTTAAATTAGCTGCTGAAGAAAATTTGCCAGCTAAAAGAAATAAGGTGATGAGGCGGCAAACAACGTTTGTATTCCATCACACCTCTCATCCATGGAGCAGGAGTCGTATTCTCATATGGATGCTTTGTTTTCTACGTCAGTTCAAGAGTTCAATAAAGAAATCAGACTATTTGGCCCTCCGTTTGGGTTTCATTACAAAGCACAAATTACCAATTTCTTATGATTTCCACAAGTACATGGTTCGGAGCATGGAAGACGAGTTCCATGGAATCCTTGGAATTAGCTGGCCACTATGGGGCTACGCCATCCTTTGCATCTTTATCAATATTCACGGTTTAAATATCTACTTTTGGCTTTCTTTCATACCGGCCGCTCTTGTTATGCTGGTTGGTACAAAACTTCAACATGTAGTATCCTCTTTGGCACTCGAAGTTTTGGAACAGACAGGTCCAGCAATTGGGACTCAAATAAAACCAAGAGATGATCTGTTTTGGTTTGGAAAGCCTGAGATTTTACTACGGTTAATACAGTTCATCATATTTCAGAATGCATTTGAGATGGCGACATTTATCTGGTCCTTGTGGGGATTTAAGGAGAGATCTTGCTTCATGAAGAACAAGTTTATGATAATCACGAGGTTGACTTCAGGTGTTCTTGTTCAGTTTTGGTGCAGCTACAGCACAGTGCCACTTAATGTAATTGTTACACAGATGGGATCTAAGTGTAAGAAAGCATTGGTGGCTGAGAGTGTGAGAGATTCACTGCATAGTTGGTGCAAGAGAGTAAAGCAGAGGTCCAAACGTGACTCTGCGCAATCTGTCACTACAAGATCAGTATGTTCACTTGAATCACTGGTTGATGAACGAGATGAAATAACCATTGCGTCGGGTACGTTGTCACGGTGCTCATCTTTCGAAACTTCAAATCAGGTGACAATACAATCTACTTCCCAACTGGAGGCCATTATTGAGTCTTCAAGCTTAAGGAGGCATGAGCTTCCCTCAACTATGGCAGATTTTCTATCACAATCTGCAAGAGCTTCTCATGTTCATGCTAATAGCCTAGACAATAATGCAGAGAGTGGCCAAGATAGCAAGGTCGAGTCACTTATCGACTTGTTCAAAAGGACATGA 1683 42.01 MEMKGGRSLAETPTYSVASVVTVMVFVCLVVERAIYRFGKWLKKTKRKALFASLEKIKEELMLLGLISLLLAQCARCISEICVNSSLFTSRFYICSEEDYATNEHILLENSLLSPNETVISRRGLSVLPHQCGEGREPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRKWENQVKLAAEENLPAKRNKVMRRQTTFVFHHTSHPWSRSRILIWMLCFLRQFKSSIKKSDYLALRLGFITKHKLPISYDFHKYMVRSMEDEFHGILGISWPLWGYAILCIFINIHGLNIYFWLSFIPAALVMLVGTKLQHVVSSLALEVLEQTGPAIGTQIKPRDDLFWFGKPEILLRLIQFIIFQNAFEMATFIWSLWGFKERSCFMKNKFMIITRLTSGVLVQFWCSYSTVPLNVIVTQMGSKCKKALVAESVRDSLHSWCKRVKQRSKRDSAQSVTTRSVCSLESLVDERDEITIASGTLSRCSSFETSNQVTIQSTSQLEAIIESSSLRRHELPSTMADFLSQSARASHVHANSLDNNAESGQDSKVESLIDLFKRT 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10163969 10170591 + CcPI632755_05g011180.1 Cco05g1118 178746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g1118 560 PANTHER MLO-LIKE PROTEIN 1 3 493 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco05g1118 560 Pfam Mlo family 6 462 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g1118 Cco-Chr5:10163969 Cco10g0068 Cco-Chr10:672511 3.50E-139 dispersed
Cco05g1118 Cco-Chr5:10163969 Cco09g2082 Cco-Chr9:35230327 1.20E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g1118 K08472 - csv:101204236 1005.74