Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g1189 ATGGCTTCCCTCTCTATTGGGATTCATTTGCCTCCATCCCATCATTGGAAGAGATTTTCACTTCAGTCCCAGTCTCCCATTTCACTCCCATTTCACACCAGCTATGGTTCTTCGTTGAGTAGAGTCAGAACTCCAAGGTTGCTTCGTAAGAACCTTCTTATGCGGGCTGAAGACGAGGATAAAAGCTCTTCACCAGCAACCTCTTCTTCGTTTGAACAACAGCCAGCTCCACCCAACTTCACTAAACAACTGGAGGAACTCTCATCCAAGTCAGGAACATGTGATCCCCTATGCTCAGTTGACGAAATAAGTTCGCAGGAGTTCGAAGATAGTTACCAGCCAAAGACTGACTTAGTAAAGGCTTTTGCAATATTTGCAGCTGCTCTTACTGGAACAGTGGCAATTAATCACTCCTGGGTTGCTGCTAATCAGGATCTTGCTATGGTGTTGTTATTTAGTATAGGATATGCTGGAATCATTTTTGAAGAATCTCTTGCCTTCAACAAGAGTGGAGTGGGATTATTGATGGCGGTTGGCTTATGGGTTGTTCGAAGTATTGGGGCTCCATCCACTGAAATTGCTGCTTCAGAGCTAACACATGCCACAGCAGAAGTCAGTGAAATTGTATTTTTCTTACTTGGGGCAATGACCATTGTGGAGATTATCGACGCCCATCAAGGATTTAAGTTGGTTACAGACAGTATAACCACTCGAAAACCACGAACTCTCCTCTGGGTGATTGGGTTTGTAACCTTTTTTCTAAGTTCAATCCTCGACAACCTGACGACCACAATTATCATGGTTTCTCTATTGCGAAAACTAGTCCCTCCATCAGAATATCGCAAGCTACTTGGAGCTGTGATCGTTATAGCAGCAAATGCGGGTGGTGCATGGACGCCTATTGGAGATGTAACCACCACCATGCTATGGATACATGGTCAGATATCAACACTGCCGACACTCAAAGGCTTGATTATACCTTCAGCTGTTTCGCTTGCAGTACCGCTGGCCCTGCTGTCCCTTACAAGTGAAGTTAATGAAAAGGGGCAGGATTTTTCGAATGTTATGGCGTCAGAGCAGATGGCTCCTCGAGGGAAGCTTGTCTTCTCTGTAGGTGTTGGAGCTTTAGTTTTTGTTCCAGTGTTCAAGGCCCTCACAGGTTTGCCCCCCTACATGGGTATGCTGCTTGGTCTTGGAATTCTCTGGATTCTGACTGATGCTATTCACTATGGTGAATCGGAAAGGCAAAAGTTGAAAGTTCCTCAGGCTTTGTCTCGTATCGATACGCAGGGAGCTCTATTTTTCCTTGGTATCCTTTTGTCTGTCAGCAGCTTAGAGGCTGCGGGTGTGTTACGCGAGTTAGCAAACTACCTTGATGCTCATATTCCGAACGTTGAACTCATTGCGAGTGCAGTCGGTGTTATATCAGCAATTATAGACAATGTACCATTAGTTGCAGCAACAATGGGGATGTATGACGTCTCCTCTTTCGCTCAAGATTCCGAGTTCTGGCAGCTAATTGCATTTTGTGCTGGCACTGGTGGATCCATGCTTATAATTGGATCTGCAGCTGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTAAGAAAGGTTAGCGGTTTCGCTTTTGCGGGATATGCTGCTGGAATTGCTGCCTATTTAGCCATTCATAACCTCAACATATCGCTACCTACAACTATTGCTGAGGTGCCTTACATTTTGGGTTCATAA 1746 45.13 MASLSIGIHLPPSHHWKRFSLQSQSPISLPFHTSYGSSLSRVRTPRLLRKNLLMRAEDEDKSSSPATSSSFEQQPAPPNFTKQLEELSSKSGTCDPLCSVDEISSQEFEDSYQPKTDLVKAFAIFAAALTGTVAINHSWVAANQDLAMVLLFSIGYAGIIFEESLAFNKSGVGLLMAVGLWVVRSIGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIIDAHQGFKLVTDSITTRKPRTLLWVIGFVTFFLSSILDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTLKGLIIPSAVSLAVPLALLSLTSEVNEKGQDFSNVMASEQMAPRGKLVFSVGVGALVFVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGVLRELANYLDAHIPNVELIASAVGVISAIIDNVPLVAATMGMYDVSSFAQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLAIHNLNISLPTTIAEVPYILGS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11049278 11054720 + CcPI632755_05g011890.1 Cco05g1189 178817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g1189 581 NCBIfam sodium:proton antiporter NhaD 173 403 - -
Cco05g1189 581 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 52 578 IPR045016 GO:0006814(InterPro)|GO:0015297(InterPro)
Cco05g1189 581 MobiDBLite consensus disorder prediction 63 78 - -
Cco05g1189 581 Pfam Citrate transporter 157 489 IPR004680 GO:0016020(InterPro)|GO:0055085(InterPro)
Cco05g1189 581 MobiDBLite consensus disorder prediction 56 78 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g1189 - - - 0.0