Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g1317 | ATGGCGACGCTAATGTCGGGCTCCAGAATTCAACCAGCAGCTTCTGTTCTTTCCTCCTCCATCAAGCGCCATCTGGGTTTTAATTCCCACCTTCGTTCCAATTGCTCGCTTTCTCCTTTTCACCATTCTTCATTCTCATTCAGGCGCTCTGGACCTAGACGATCTCTCTCTGTTTCCATGTCCGTTACCCCTCTAGAAGCCTGCGTCAAAGCTTCCATTACCGTACCCAACAAGCTCGGCGACTGCCCTTTTTGTCAAAGGGTATTACTGACTTTGGAGGAAAAGCATGTACCCTATGACTTAAAGTTGGTAGACCTGTCAAACAAGCCAGAATGGTTCTTAAAAATAAATTCAGAGGGCAAAGTTCCCGTTGTTAAATTTGATGAGCAGTGGGTTGCAGATTCAGATATTATAACACAAACACTGGAAGAGAAGTACCCAAATCCACCTTTAGCTACCCCTCCTGACAAATCTTCAGTAGGATCAAAGATTTTCTCCACATTTATTGCTTTTCTAAAGAGCAAGGATCCTAACGATGGAACAGAACAAGCATTGATTAGCGAGCTAAGTTCTTTCAATGATCACATCAAAGAGAATGGCTCTTTTATCAACGGGAAAGAGATTTCTGCTGCAGACCTGTCACTTGGTCCAAAGTTGTACCATCTAGAAATTGCATTGGGTCACTACAAGAACTGGTCTGTTCCAGACAGTCTTCCTTACGTTAAATCTTACATGAAGAGCATATTTTCAAGAGAATCATTTGCAAACACTCGTGCCCTGCCTGAGGATGTTATTGCTGGTTGGCGTCCGAAGGTTTTTGGTTAA | 825 | 43.27 | MATLMSGSRIQPAASVLSSSIKRHLGFNSHLRSNCSLSPFHHSSFSFRRSGPRRSLSVSMSVTPLEACVKASITVPNKLGDCPFCQRVLLTLEEKHVPYDLKLVDLSNKPEWFLKINSEGKVPVVKFDEQWVADSDIITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALISELSSFNDHIKENGSFINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKSIFSRESFANTRALPEDVIAGWRPKVFG | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 13578245 | 13583189 | - | CcPI632755_05g013170.1 | Cco05g1317 | 178945 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g1317 | 274 | Pfam | Glutathione S-transferase, N-terminal domain | 82 | 144 | IPR004045 | - | |
Cco05g1317 | 274 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 65 | 271 | IPR044627 | GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(InterPro)|GO:0045174(PANTHER)|GO:0098869(InterPro) | |
Cco05g1317 | 274 | SFLD | Main (cytGST) | 81 | 248 | - | - | |
Cco05g1317 | 274 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 63 | 151 | - | - | |
Cco05g1317 | 274 | SUPERFAMILY | Thioredoxin-like | 80 | 149 | IPR036249 | - | |
Cco05g1317 | 274 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 72 | 150 | IPR004045 | - | |
Cco05g1317 | 274 | SUPERFAMILY | GST C-terminal domain-like | 145 | 272 | IPR036282 | - | |
Cco05g1317 | 274 | Gene3D | Glutaredoxin | 63 | 151 | - | - | |
Cco05g1317 | 274 | FunFam | Glutathione S-transferase DHAR3, chloroplastic | 152 | 274 | - | - | |
Cco05g1317 | 274 | SFLD | Glutathione Transferase (cytosolic) | 81 | 248 | IPR040079 | - | |
Cco05g1317 | 274 | CDD | GST_N_family | 82 | 143 | - | - | |
Cco05g1317 | 274 | Gene3D | - | 152 | 273 | - | - | |
Cco05g1317 | 274 | CDD | GST_C_DHAR | 151 | 271 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g1456 | Cco-Chr2:26979410 | Cco05g1317 | Cco-Chr5:13578245 | 1.20E-71 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g1317 | K21888 | - | csv:101203335 | 489.189 |